| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3822 |
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| Symbol | |
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| ID | 4175602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4615767 |
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| End bp | 4617098 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056850 |
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| Product | sugar transporter |
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| Protein accession | YP_663376 |
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| Protein GI | 109900121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.103912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAA TCACGTTTTG GGCAATGACG GTCGCCGTCG CAGGGTTTCT GTTTGGGTTC
GACACCGCGG TAATTTCTGG TGCAGATAAG CCAATTCAAA CCTTATGGAA TACGTCACCA
CTCTTCCACG GTTTGTTTAT CATGTCGGCA GCATTATGGG GGACAGTAAT AGGCGCACTA
GGCGGTAACT ATCCCTGCGA TAAATACGGG CGCAAACCCA CCCTAGTAGC TATTGGTATA
TTGTATCTAG TCTCTGCCTT GGGTTCTGCT CTTGCTACAG ACCCATACAC CTTTGCGATA
TTACGCTTTA TTGGCGGCAT TGGGGTGGGC ATTTCGTCTA TTGCGGTACC CGCTTATATT
TCTGAAATAG CACCGGCATC TCATCGAGGC CGCTTGGTCG CGATTTATCA ATTTCAAATT
GTGTTTGGTA TTTTAATTGC CTTTCTTTCT AACTACGTTC TGTCTGGTCT ATTAGACTTT
GATTGGCGCA TGATGCTTGG TGTGGAAGCC ATACCCGCGT TGGCTTACTT GCTGTTGATA
TTGAAAGCCC CTGAAAGTCC TCGTTGGTTA ATTTTGCATG GAAACGATTC GGTTAAAGCC
CAGCAAGTCC TTATATCACT GGGTGAAACG AACAGTGAAA GCATTGTTAA TGAGGTTATT
AATGAGAATC AACATAAACG TTCAGGACGT TTATTTAGCA CCTCATATCG TTTTCCTATT
GTGTTGGCGT TCTTGCTTGC GGCGTTTAAT CAATTATCAG GCATCAATTT TATTATTTAC
TACGCGCCCA GAGTTTTTGA GCTAGCCGGG CTAGACACAA GCGCCTCGCT GCTGTCGGGC
ACAGGGATTG GTGTGATAAA CCTACTTTTT ACCTTTGTTG GGATTTACTT GATTGATCGA
GTAGGTCGAA AAACACTTAT GTATGCAGGC TCGTTAGGTT ACATCATGTC ACTTGCAGTG
GTGACGTGGG CGTTTTATTC AGAGCAAGGC GGGATGATGG TTGTGTTTTT CGTATTTACC
TTTATTGCCT CCCATGCAAT TGGTCAGGGC GCCGTAATCT GGGTATTTAT TGCTGAAATA
TTTCCCAACA AGGTACGCTC AAAAGGACAG TCACTTGGCA GTGGTACGCA CTGGATTTTT
GCAGCCTTAA TCACCCTGTT TATGCCATAT TTTCTATCAG AATATGCTCC AAGTACTGTA
TTCGCGTTTT TCACTTTTAT GATGGTTCTA CAACTCATAT TTGTATTTAT ATTAATGCCT
GAAACGAAGG GGAAATCCCT AGAAGCACTT TCAGCGATAC TCACTAAGTC AACAAAGGAG
AGTCAACAAT GA
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| Protein sequence | MNKITFWAMT VAVAGFLFGF DTAVISGADK PIQTLWNTSP LFHGLFIMSA ALWGTVIGAL
GGNYPCDKYG RKPTLVAIGI LYLVSALGSA LATDPYTFAI LRFIGGIGVG ISSIAVPAYI
SEIAPASHRG RLVAIYQFQI VFGILIAFLS NYVLSGLLDF DWRMMLGVEA IPALAYLLLI
LKAPESPRWL ILHGNDSVKA QQVLISLGET NSESIVNEVI NENQHKRSGR LFSTSYRFPI
VLAFLLAAFN QLSGINFIIY YAPRVFELAG LDTSASLLSG TGIGVINLLF TFVGIYLIDR
VGRKTLMYAG SLGYIMSLAV VTWAFYSEQG GMMVVFFVFT FIASHAIGQG AVIWVFIAEI
FPNKVRSKGQ SLGSGTHWIF AALITLFMPY FLSEYAPSTV FAFFTFMMVL QLIFVFILMP
ETKGKSLEAL SAILTKSTKE SQQ
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