| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3821 |
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| Symbol | |
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| ID | 4175601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4614280 |
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| End bp | 4615254 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056849 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_663375 |
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| Protein GI | 109900120 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.383217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTAACG CGTTTAATCG CCCGGATCAG TTATCCGCTA AATTGCGGGA GCGCATCCTT
CGCGAGTCAG CGGAACTGGG TTATCACGGC CCTAACTTTG CTGCTCGCTC ATTGCGTAAA
GGCCGGTCAG ATGTCATTGC TGTTGTACTT GCTGATTCCA TTAGTTATAG CCTGTCAGAT
CCGGTCGCCA GTCAGTTGCT ACAGGGGGTT GCGGAGGTGT TGGGTGAAAA CAAAAAACAA
CTCTTATTGC TCTCCAGTGA ATCAGACGGG CTAGAGCACA GCAGTGCTGA GTCGTTGCCT
GATGGCTTCA TTTTTTATGG CACACCCAGT GGCGATATTT TTGCCCGAGT GAAACGCTCT
GGTAAGCCAA TTATTGCTGT AGACTTTGAA ACCCACGAAG CTGAATCTGT CAATATTAAC
AATGAAGATG GCGCGTTCAT CGTGGCGAAT CATGCTTTAA TTAATGAACC AAAAAACGTG
GCTGTATTAG GTTTGCGTTT GGTGGATTCA CAACGTATCT GTCGCCTCAC TGACCAAGAT
ATGCATGTTA AATCAAAAGA AATCTCTCGC AGTCGATTAA AGGGGTATTT GCGTGCATTT
GATGAGAAGC AACTCACTAT TTCCCCTAGC CAAATTTGGC ACATTCCTCT AAATACCCCA
GAGATGGCAG AAATAGCTGC CAAGGAAGCG CTGACCCTTA GCCCGTTACC TGAGGTCATT
TTATGCATGA GTGATGTTAT TGCGCTCGGC GTGCTAAGAG TGGCTAATGA GTTGAATATT
GCAATACCAG AACAAGTGCA AGTGACTGGT TTTGACGATA TACCTGAGGC GAACCGAAGT
AAGCCTGGTC TCACCACTGT GTGTCAGCAA AGCTTAGAAA AGGGCAGGGT CGCTACTCGT
TTACTCCTCG ACAAAGATCA CAATGACAGC GTCGTACTTG AAACGCGACT GGTGATTAGA
GCGAGTTGCG CATAA
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| Protein sequence | MSNAFNRPDQ LSAKLRERIL RESAELGYHG PNFAARSLRK GRSDVIAVVL ADSISYSLSD
PVASQLLQGV AEVLGENKKQ LLLLSSESDG LEHSSAESLP DGFIFYGTPS GDIFARVKRS
GKPIIAVDFE THEAESVNIN NEDGAFIVAN HALINEPKNV AVLGLRLVDS QRICRLTDQD
MHVKSKEISR SRLKGYLRAF DEKQLTISPS QIWHIPLNTP EMAEIAAKEA LTLSPLPEVI
LCMSDVIALG VLRVANELNI AIPEQVQVTG FDDIPEANRS KPGLTTVCQQ SLEKGRVATR
LLLDKDHNDS VVLETRLVIR ASCA
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