| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3815 |
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| Symbol | |
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| ID | 4175595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4604136 |
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| End bp | 4605362 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056843 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_663369 |
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| Protein GI | 109900114 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCAT TAAATTTTTT TAAGAATGTC GGGCCCGGCG CCTTAGTCGC CGCTGCCTTT
ATAGGCCCGG GCACGGTCAC TGTGTGCACA TTAGCCGGAG CGAATTTTGG ATATACCTTG
TTGTGGGCAT TACTGTTCGC CACTGTCTCA ACCATTATTT TCCAAGAAAT GTCTGGGCGC
TTGGGCACCA TAGCGCAAAA GGGACTGGGT GAAGCGCTAC GCGATAGCTT GCAACACTCG
ATGTGGAAAT GGCCTCTGTT TGCCCTGATT GCCATGGCGC TTTACGGTGG CAATGCCGCA
TACGAAGCGG GCAATTTATC TGGGGCGGCG CTTGGAGTGA GTGCGATATT GGATGAGCCA
AACGACACTA TGTTTACTTG GACCATCGTT CTTATCACGC TTGTCGCAGC GTTAGTACTT
TGGCGAGGCA GCTACAAGCA GGTAGAGCGC TTGCTTATGG TGTTAGTGCT TTTTATGGGT
GTGGCATTTG TCAGCACGTT TATTGTCAGC CAGCCTGATT TTGGCGCCTT TTTCCATGGT
ATGTTCACGC CGACCCTGCC GGATGATAGT TTAATTACTG TGGTCGCTTT AATCGGCACG
ACTGTTGTGC CATATAACTT ATTTTTACAC GCCTCTGCAG CAAAGGCGCG CTGGCAAGGT
GAAGCGGATT TGTCTGCTGC CCGCGCTGAT TCAGTGGTCT CTATTGGTTT AGGTGGCTTG
GTGGCAATGT TCATAGTATC TACGGCCGCT GCGAGTTTAT TCTCTCGCGG TTTAGGGGCG
AATAGTGCAG CGGATATGGC GATTCAGCTG GAGCCTTTGT TTGGCAGCTT TTCTAAGTAT
CTATTGGGTG CTGGATTATT AGCTGCGGGC CTGAGCAGTT CACTGACCGC CCCATTAGCA
ACAGCCTATG CCATCACTGA AATCGTTAAC CCAAACGCCA AAATGAAAGA AAAAATATTT
CGCGGTATCA GCTTAAGTGT GCTGGCAGTG GGAATGGTCT TTGCGCTAAG TGGCGCTAAA
CCAATCAATA TTATTATTGG GGCTCAGTTT GCCAATGGTT TGTTGCTCCC CATCATTGCT
GCCTTCTTAC TTTACACCAT GAATAACAAG GCACTTTTGG GCAAATACAC CAATGGCATT
GTGGCCAATA GTTTGGGCGT AATCGTATTT ATAGTGTCGC TGGGGTTAGG CGTACGCTTG
GTTCTAAAAT CACTGTCTGT GATGTGA
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| Protein sequence | MPSLNFFKNV GPGALVAAAF IGPGTVTVCT LAGANFGYTL LWALLFATVS TIIFQEMSGR
LGTIAQKGLG EALRDSLQHS MWKWPLFALI AMALYGGNAA YEAGNLSGAA LGVSAILDEP
NDTMFTWTIV LITLVAALVL WRGSYKQVER LLMVLVLFMG VAFVSTFIVS QPDFGAFFHG
MFTPTLPDDS LITVVALIGT TVVPYNLFLH ASAAKARWQG EADLSAARAD SVVSIGLGGL
VAMFIVSTAA ASLFSRGLGA NSAADMAIQL EPLFGSFSKY LLGAGLLAAG LSSSLTAPLA
TAYAITEIVN PNAKMKEKIF RGISLSVLAV GMVFALSGAK PINIIIGAQF ANGLLLPIIA
AFLLYTMNNK ALLGKYTNGI VANSLGVIVF IVSLGLGVRL VLKSLSVM
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