| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3814 |
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| Symbol | |
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| ID | 4175594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4600037 |
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| End bp | 4603918 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638056842 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_663368 |
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| Protein GI | 109900113 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCA CTGCCAGTGA GCAATCGATA CCTAACCTTC ATTCTTCATC TGATACAAAT
GGCTCAGACG CCAAGCGCTG GGATTTTTGG ATCGACAGGG GCGGTACGTT CACTGACATC
GTAGCGAAAA CACCCCAAGG TCAGTTTCTA ACGAGAAAGC TGCTGTCTGA AAATCCAACG
GCTTACGAAG ACGCTGCTTT GCAAGGTATT CGTGATTTTC TAAATGTTGA GGCCACTGCG
CCTATCCCGA ACCAATTGAT TAGCAGCGTG AAAATGGGCA CAACCGTGGC TACCAATGCG
TTGCTAGAGC GCAAGGGCGA GCCCACCGTG CTTATTATCA CTGCAGGTTT ACGGGATGTG
CTCGAAATAG GCTATCAAGT GCGTCCAAAA ACCTTCGCCT TAAATATTGA AAAACCTGAA
GTGTTGTATC AAGACGTTAT CGAAGTGTCT GAGCGTTTCG ACGATGAAGG AAACGAGCTA
GTCGCACTAT GCGAGGAGAC TGTGCGCCAA GAACTTCAGC AGCGCTATGA GGCAGGGTTT
CGTTCGGTCG CCATAGTATT AATGCATGCG TATAAATTTC CCGAGCATGA ATTACGAATT
GCGGCGATTG CCAAAGAAAT TGGTTTTAGC CAAATCAGTA CCAGTCACGA TGTAAGCCCC
ATGGTGCGTA TTGTACCAAG AGGCGATACC ACAGTGGTTG ATGCCTATTT ATCGCCTATT
TTACGTCGTT ATGTGCAACG AGTTGGGGCA GCAATTGGCG CTGAGACAGG CGGAGGCACA
AGTTCAAAAA CAAGTACTGG TACCGATGAA AACACTGCTA TGGTTGAAGC AAAATCGGTG
AGTAGTGATA GCAAGCGCCT GCAGTTTATG CGCTCATCCG GCGGTTTAAC CGCAGCGAGT
AAATTTCAGG GCCGGGACGC GATTTTATCT GGCCCTGCTG GTGGCATTAT CGGGGCCGTG
CGCACTAGCG AATTAGCCGG TTTTAATAAA ATCATCGGTT TTGATATGGG CGGCACCTCT
ACGGATGTCT CTCATTATGC AGGGGATTTT GAACGCGCCT TTGAAACCCA AGTGGCTGGT
GTGCGCATGA GTGTACCCAT GATGAGCGTG CATACGGTAG CCGCAGGCGG TGGTTCAATA
TTACACGTTG ATGAGCAACG CTTTCGCGTA GGGCCGGAAT CAGCGGGGGC ATTTCCTGGC
CCCATGTCTT ATCGAAATGG CGGGCCGTTA ACCGTGACCG ATGCCAACGT GTGCTTGGGC
AAAGTTGACC CGCGCTTCTT CCCTAAATTA TTTGGGCCCC AGCACAACCA AGCTATTGAT
GATGAGGCCG TTAAAGCTGC CTTTGCAGAG ATTGCCCAAC AACAAAGCAC GCAAAGCAGC
CCAGAACATG TGGCTGAAGG CTTTTTGACC ATAGCCATTG AACATATGGC CCAGGCGATC
AAGAAAATTT CCATTGAGCG TGGGTACGAC GTGCAGCAAT ACGCCTTAAC CTGTTTTGGC
GGCGCAGGCG GCCAGCATGC GTGTTTAGTA GCAGACCGCT TGGGCATGCA AACTATCTTT
ATTCATCCTT TTGCCAGTAT TTTGTCGGCT TATGGTATGG GGCTGGCGGA TATCCGCAGT
CAACGCACGG AAACCTTTCA AAAAGTGATG GATCCCAGTG GCCTTGAGGC GCTCAATGCT
GCCTTTGCTC GTTTAAAAGC GCACACCAGT AAGGAGCTTA AAGATCAAGG AATTGAAGAT
GCCGAGCAAA GCCATAGCGC AACGGTATTT TTACGTTATC AGGGCACCGA TACGACTCTG
CCAATAAGCC AAGCCACTAT CGATCAAATG CAGCAAGACT TCGAAGCTCA ACACGCAGCT
CAATATGGCT TCATCTCCCC TGATAAAGCC ATCATCGTTG AATCTATCTC TATGGAGTCT
GCGGGTGGGG GGCAATATAT TGATGAGCCT GTTTATCCTC TTGCTGAATC AGCCGTGCCT
GATGCCCAGT ACACGACCCA AGTATTTTCA GGAGGAGCGT GGCACAACAC GCCTATTTAT
TCGCTAGCTG AGTTGCTGCC AGGTCATCAA GTTCAAGGCC CGGCGATTAT TATAGAGGAC
AATGGCACCG TTATTGTGGA GCCAAATTGG CTTGCAAGCA TGACCGAGCA CAAGCATTTG
GTGTTGAAAA AGAGAGCAGT CGACGCCTTG GAAAACAGCG ACACTCAAAA TACACCAGCG
GTTAGTCATG AGAAAAGCGA TCCTGTGCTG GTGGAAATCT TCAATAACCA GTTTATGTCG
ATAGCGGAGC AAATGGGTAT AGTGCTGCGC AATACGTCAT CTTCGGTCAA CATCAAGGAG
CGATTGGACT TTTCCTGCGC CGTGTTTGAC GTGCAGGGTC AGCTAATTGC TAATGCGCCA
CATATTCCGG TGCATTTGGG GTCGATGGAT GCCACGGTGA AAGTGCTTAT TCAGAGCGGC
CTGAGTATTG AAGTAGGTGA TGTGTTTATT CACAACGATC CTTTTAACGG CGGCTCTCAC
TTACCTGATG TGACGGTGAT CACCCCTATC TTTGATCAGC AGAAAGAAAA CGTAATGTTC
TTTGTGGCCA GCCGCGCGCA TCACGCAGAT ATAGGTGGTA TTGCACCAGG CTCTATGTCA
CCGAAGGCTA AAACTATTAT TGAAGAAGGC GTGGTGATCC CGTGCATGAA GTTGGTCTCA
AAGGGGCGCT TTCTGCATGA CGAGCTGCAA GCATTGATGC AAGGTGCGAC TTATCCGGTA
CGTAATTTCA ACCAGAATGT GGCCGACTTA CAGGCTCAAA TCGGCGCTAA TCGCCGAGGT
TATCAAGAGT TACTTAAATT AGTCGATGAA CACACCTTGG GTGTAGTGAA CACCTACACC
CAACATATTA TGGATAATGC TGAAGAAAGC GTAAGGCGCA CCATAGACAC TCTACAAGGC
GGCGAGTACC GCTACGAGAT GGATGGCGGC TTACATATTT GCGTGAAAGT AGCAGTGGAT
CACGCTAATC GCAGTGCCAG CATCGATTTT ACTGGCACGA GCCCCCAGCA GCCGAATAAT
TTCAATGCGC CTGGGGCGAT TACGCAAGCC GTTGTGCTTT ATGTTTTTCG CTGCCTGGTC
GATAGCGATA TCCCGTTAAA CGCAGGCTGC ATGCGCCCAC TCAGCATTCT TGTGCCAGAG
GGGTCAATGC TTAACCCTGT TTACCCCGCG GCCGTGGTTG CCGGTAACGT AGAAGTCAGC
CAAGCGGCGA CTAACGCATT GTTCGGGGCG TTGGGTACGC TCGGCATGAG CCAAGGCACT
ATGAATAACC TGACGTTCGG TAATGCGAAG TACCAATATT ATGAAACCAT TTGCTCTGGC
GCCCCTGCAG TTCCTGGTTT TGATGGCGCA GCGGCAGTGC ATACCCACAT GACAAACTCA
CGCTTGACGG ATCCTGAGAT TCTAGAGTCT CGTTACCCCG TATTGTTGGA CAAGTTTATC
GTACGCAGAG GTTCGGGCGG CAAAGGCCAA TGGGATGCGG GTGACGGTAT CGAAAGACGC
ATTCGCTTTT TAGCGCAGAT GCAGTGCGCA ATATTGTCTG GCCATCGGGA AGTCCCGCTA
GCCGGTGTTA ATGGGGGGGA TTCAGGTGAA CTTGGGCATA ACTGGATTGA GCGTAACGGC
CAGAAATGGT TAGATTTGAC CGGCAACGGT GAAACCCAAG TACAAGTAAA TGATGTAGTG
GTTATTCAAA CACCTACTGG CGGCGGGTTT GGCAGTGTTT TTGATAAAAC GACTGATAAA
GCGACTGATA AAAAAACGGT AGACAAAAAG AGAGTAGACA AAAAGAGAGC AGACAAAAAG
ACGCAAGGTA AAAAGACAGA TACCACTGGG CAAGGAGAGT AA
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| Protein sequence | MTRTASEQSI PNLHSSSDTN GSDAKRWDFW IDRGGTFTDI VAKTPQGQFL TRKLLSENPT
AYEDAALQGI RDFLNVEATA PIPNQLISSV KMGTTVATNA LLERKGEPTV LIITAGLRDV
LEIGYQVRPK TFALNIEKPE VLYQDVIEVS ERFDDEGNEL VALCEETVRQ ELQQRYEAGF
RSVAIVLMHA YKFPEHELRI AAIAKEIGFS QISTSHDVSP MVRIVPRGDT TVVDAYLSPI
LRRYVQRVGA AIGAETGGGT SSKTSTGTDE NTAMVEAKSV SSDSKRLQFM RSSGGLTAAS
KFQGRDAILS GPAGGIIGAV RTSELAGFNK IIGFDMGGTS TDVSHYAGDF ERAFETQVAG
VRMSVPMMSV HTVAAGGGSI LHVDEQRFRV GPESAGAFPG PMSYRNGGPL TVTDANVCLG
KVDPRFFPKL FGPQHNQAID DEAVKAAFAE IAQQQSTQSS PEHVAEGFLT IAIEHMAQAI
KKISIERGYD VQQYALTCFG GAGGQHACLV ADRLGMQTIF IHPFASILSA YGMGLADIRS
QRTETFQKVM DPSGLEALNA AFARLKAHTS KELKDQGIED AEQSHSATVF LRYQGTDTTL
PISQATIDQM QQDFEAQHAA QYGFISPDKA IIVESISMES AGGGQYIDEP VYPLAESAVP
DAQYTTQVFS GGAWHNTPIY SLAELLPGHQ VQGPAIIIED NGTVIVEPNW LASMTEHKHL
VLKKRAVDAL ENSDTQNTPA VSHEKSDPVL VEIFNNQFMS IAEQMGIVLR NTSSSVNIKE
RLDFSCAVFD VQGQLIANAP HIPVHLGSMD ATVKVLIQSG LSIEVGDVFI HNDPFNGGSH
LPDVTVITPI FDQQKENVMF FVASRAHHAD IGGIAPGSMS PKAKTIIEEG VVIPCMKLVS
KGRFLHDELQ ALMQGATYPV RNFNQNVADL QAQIGANRRG YQELLKLVDE HTLGVVNTYT
QHIMDNAEES VRRTIDTLQG GEYRYEMDGG LHICVKVAVD HANRSASIDF TGTSPQQPNN
FNAPGAITQA VVLYVFRCLV DSDIPLNAGC MRPLSILVPE GSMLNPVYPA AVVAGNVEVS
QAATNALFGA LGTLGMSQGT MNNLTFGNAK YQYYETICSG APAVPGFDGA AAVHTHMTNS
RLTDPEILES RYPVLLDKFI VRRGSGGKGQ WDAGDGIERR IRFLAQMQCA ILSGHREVPL
AGVNGGDSGE LGHNWIERNG QKWLDLTGNG ETQVQVNDVV VIQTPTGGGF GSVFDKTTDK
ATDKKTVDKK RVDKKRADKK TQGKKTDTTG QGE
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