| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3813 |
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| Symbol | |
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| ID | 4175593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4599438 |
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| End bp | 4600034 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056841 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_663367 |
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| Protein GI | 109900112 |
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| COG category | [K] Transcription |
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| COG ID | [COG5631] Predicted transcription regulator, contains HTH domain (MarR family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0334125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA AGGATAAAAC GACTAAGGGC ACAGCTGAAG TCACTGATCG CGAACGAACT
GACGTCGAGC ACTCTGATAC CCAAAGCACG GATAACCAGA GAAAAATCGT TTCCTCTGAG
CATTTGGCCA GTGATGGAAA TTGGCCATTA TCAGAAGTCG AATATGGTAT GACGGTGGTG
TACAACGCGT TTTCACAGTG GATGGTGCGC TGCGCTAATG CAGCCGGTAT TGGTGAGTTG
GCGGTGCTAG ATATTTTGAT ACTGCACAAT ATCAATCATC GAGGGCGCGA AAAGCGCTTG
AACGACATAG CCTTTATGCT GAATATTATT GATACCCACA CAGTGAATTA CGCGCTTAAA
AAGTTGCTAA AGCTTGAATT AGTCATCGGC ACTAAGCGTG GTAAAGAGAT TTTTTACGCC
ACGTCTGACA AGGGGAAACT GGCTTGTGAG GAGTATGGTC GCGTTCGTGA GCGATGTTTA
CTTGATGGGC TAAGTATGCT CGATATCGAC CAACAAGAAT TAGCTAAACT GGCGTCCACA
TTGCGTTCAA TGTCAGGTTT ATACGACCAA GCATCGCGCG CAGCGGCATC TTTGTAA
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| Protein sequence | MSDKDKTTKG TAEVTDRERT DVEHSDTQST DNQRKIVSSE HLASDGNWPL SEVEYGMTVV
YNAFSQWMVR CANAAGIGEL AVLDILILHN INHRGREKRL NDIAFMLNII DTHTVNYALK
KLLKLELVIG TKRGKEIFYA TSDKGKLACE EYGRVRERCL LDGLSMLDID QQELAKLAST
LRSMSGLYDQ ASRAAASL
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