| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3784 |
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| Symbol | |
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| ID | 4175564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4558711 |
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| End bp | 4558920 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056812 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_663338 |
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| Protein GI | 109900083 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACTA AAACTACTGG TTCTGTAAAA TGGTTCAACG AAGATAAAGG TTTTGGCTTT
ATCGAGCAAG AATCTGGTCC TGACGTTTTC GCTCATTTCA GCGCAATCGT TAGCGAAGGC
TTTAAAACAT TGGCTGAAGG CCAACGTGTA GAGTTTACCG TGACTCAAGG CCAAAAAGGC
CCTCAAGCTG AAAACATCGT TTGTATCTAA
|
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| Protein sequence | MSTKTTGSVK WFNEDKGFGF IEQESGPDVF AHFSAIVSEG FKTLAEGQRV EFTVTQGQKG
PQAENIVCI
|
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| |