| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3779 |
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| Symbol | |
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| ID | 4175559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4552259 |
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| End bp | 4554175 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056807 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_663333 |
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| Protein GI | 109900078 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAT TACCGGTCAT CGTTGGATTT GGTGGTTTTA ATGCCGCTGG TCGCAGTTCG
TTTCATCATG CTTATAAAAG AATGGTAATA GAAAGCTTGC CTGCGAGTGA ACAAGAAGAA
ACCCTGCTTG GTTTGGCCAC AATGATGAAG TTGGTGCGTT TTGAAAACGG ACGCTTTTTT
GATAACGCGC GTGAGAATAA TCAACAAACT TTAACACCAG AAGAAGTCGT TGAACGTTTC
TCAGAACAAA TTTTAAATTC GACGCTGATT CGTACCATCG AAAAAAGCCA TTTCGATGTT
AATGCCGTGC ATTGGCAAAA AAACGTCACT ATGCACTCAG CAGACAAAGC CGGTATCTGT
TTTGAACTAA CGCGTAAACA ATTACCTGAG CCAATACCAT CAAATTGGCA GTTAACTGAT
ATTGATAAAG ACCGAGTGAA GGTTAACATA ATCGGCGAAG TCGATTTCAA AGTAGACACT
TATCGTGAAT GCCCAGTAAA AGTAGCAGGG CAATTACCCA GCGGATTTAA CCCCGAAGAT
CACTACAATG CCCGCTTTCA TCCTCGCGCC TTACAAATGG CGATTATGGG TGCATCAGAT
GCCATTCGAT CATTAGGCAT GGAATGGAAA ACAATCGCCG ATGCGGTCAA ACCAGACGAA
ATAGGTGTAT ACGCCAGTAA TGCTATGTCA CAACTGGATG AAAATGGTTT TGGTGGCATG
TTGCAATCTC GCTTGAAAGG CGGCCGGGTC AGTACTAAGC AGTGCCCACT AGGTTTAAAC
ACTATGCCTG CTGACTTTGT GAATGCTTAT GTATTAGGGA ATGTAGGTCA TACGAGTGCA
ATTGTTGGGG CCTGTGCCAG TTTCCTTTAT AACCTCAGTG CGGCCATTGA AGATATAAAA
AGTGGTAAAC GCCGGGTGGC CGTCGTTGGC AATGCCGAAG CCCCTATATT GCCAGAGGTC
ATTGATGGTT ATGCCACCAT GGGCGCACTT GCCAGCGAAG ACAATTTAAA ACGTTTAGAT
CAATCTGATA CCGTTGACCA TCGCCGCGCT AGTCGTCCTT TTGGCGAAAA TTGTGGTTTC
ACCATAGCAG AATCAACCCA ATACGTGGTG TTGATGGACG ATGCATTGGC GTTAGAACTA
GGGGCGGATA TTCATGGCGC AGTAAGCGAT GTATTTATTA ACGCTGACGG TTATAAAAAA
TCCATATCAG CACCGGGTCC AGGTAACTAC ATCACCATGG CTAAGGCTGT CGCTGCGGCC
CGTGCGATTG TGGGTGATGA GTCTGTTCGT GAGCGCTCGT TTATTCAAGC TCACGGTTCA
AGTACGCCAG CTAATCGCAC CACAGAATCA CGTATTTTTC ATGATGTTGC TAAGATTTTT
GATATTCAAA ACTGGCCAGT CACTGCGGCA AAAGCCTATT TAGGCCATCC GTTGTCACCC
GCAAGTGCCG AACAGTTAGT GGTGAGTCTT GGGGTGTTTA AACATGGATT TATCCCGGGT
ATTAAAACCA TTGATAAAGT GGCAGATGAC GTGTTTGATG AGCGCTTAAA TATCTCAATA
ACAGATATCG ATAAAGGTGC AGGAAATATC GACGTCGCCT TTTTGAACTC CAAAGGATTT
GGCGGTAACA ATGCCACTGC GACGTTATTA TCGCCTCACG TTGTTGATAG CATGCTCGCT
AAGCGATACA GCAGTGAAGA TATCGCCGCT TATGAGTCTC GCCGTGAACA AGTACGTGAA
AAAGCCATGG CTTATGACCT ATCTGCCAAC CAAGGCAACT TTGACACTAT TTACCATTTT
GGTCAGGATC TTATCAAAGA GGATGACATT CAAATGACCA GCCAAGAAAT TCGGATTGCT
GGATTTGCTA ACCCTATCGA CTTAAGAATG AAAAACCCTT TTGAAGATAT GATTTAG
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| Protein sequence | MSSLPVIVGF GGFNAAGRSS FHHAYKRMVI ESLPASEQEE TLLGLATMMK LVRFENGRFF
DNARENNQQT LTPEEVVERF SEQILNSTLI RTIEKSHFDV NAVHWQKNVT MHSADKAGIC
FELTRKQLPE PIPSNWQLTD IDKDRVKVNI IGEVDFKVDT YRECPVKVAG QLPSGFNPED
HYNARFHPRA LQMAIMGASD AIRSLGMEWK TIADAVKPDE IGVYASNAMS QLDENGFGGM
LQSRLKGGRV STKQCPLGLN TMPADFVNAY VLGNVGHTSA IVGACASFLY NLSAAIEDIK
SGKRRVAVVG NAEAPILPEV IDGYATMGAL ASEDNLKRLD QSDTVDHRRA SRPFGENCGF
TIAESTQYVV LMDDALALEL GADIHGAVSD VFINADGYKK SISAPGPGNY ITMAKAVAAA
RAIVGDESVR ERSFIQAHGS STPANRTTES RIFHDVAKIF DIQNWPVTAA KAYLGHPLSP
ASAEQLVVSL GVFKHGFIPG IKTIDKVADD VFDERLNISI TDIDKGAGNI DVAFLNSKGF
GGNNATATLL SPHVVDSMLA KRYSSEDIAA YESRREQVRE KAMAYDLSAN QGNFDTIYHF
GQDLIKEDDI QMTSQEIRIA GFANPIDLRM KNPFEDMI
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