| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3756 |
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| Symbol | |
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| ID | 4175536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4525491 |
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| End bp | 4526447 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056785 |
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| Product | transposase IS116/IS110/IS902 |
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| Protein accession | YP_663311 |
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| Protein GI | 109900056 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.723193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAA AAACAAATCA AAGCGTTAAC GTCGGTGTCG ATACGGGCAA GTTTCAATTG
GATATTTATA TCCGCCCTCA CGATATTTAT TTCACTGTTT CTAACGATGA AAAGGGTATC
AAAGAAGCCA TTAAAAAAAT CCAACAGCAT TCGCCTGGGC GTATCGTCAT TGAAGCAACT
GGCCGATTAG AAATGCCGTT TATTATCGCG TGTGCAAATG CTAATTTACC CTTCGTTGTC
GCCAATCCCA TTCACATTAA ACGCTTTGCT GGGGCGATAG GTCAGCGAGC TAAAACAGAC
AAACTAGATG CTCAATTGAT TGCTCATTAT GGTGAAGCTA TTCAGCCTAA GTTATCTCAA
CTAAAACCAG ATACTATGCA GGCTATGAGT GATTTAGTTG CAAGGCGAAA TCAATTGCTC
GTCATGCAAA CAATGGAAAA AAACCGCCTG CAAATTCTAC CAAAAGAACT CGCCATGACC
ATCAAACCTA TTCTCACTGC CTTTAAGAAT CAGATAACCA AAATCGAGAA TAAAATTGTC
GCGCTCATTG AATCTTGTCC TGATTATCAA GCGAAGAATT GCATCTTACA GAGCATGAAA
GGAATAGGAA AAATAGCCTC CGCTTCCATC ATCAGTAACC TGCCAGAGTT AGGTTACATG
ACCAACAAAC AAGCCTCTGC GTTAGTCGGT GTGGCTCCCA TGAATCGAGA AAGTGGGCGC
TATAAAGGGT TGCGGAAAAT CCAAGGTGGC AGACATCAAG TCAGAACCGT TTTGTACATG
GCGATGATGT CAGCGATACA AAGTAACCCC GTATTTAAGG AAACATATCA ACGATTAGTC
GCAGCAGGAA AGCCTAAGAA AGTGGCTATT ATTGCGTGCA TTAGAAAGAT GGTTGTTATC
TTAAATTCAA TGCTCAGAGA CGGGGTCATG TGGGAAGCGC CGAAGACTAC AAATTAG
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| Protein sequence | MNPKTNQSVN VGVDTGKFQL DIYIRPHDIY FTVSNDEKGI KEAIKKIQQH SPGRIVIEAT
GRLEMPFIIA CANANLPFVV ANPIHIKRFA GAIGQRAKTD KLDAQLIAHY GEAIQPKLSQ
LKPDTMQAMS DLVARRNQLL VMQTMEKNRL QILPKELAMT IKPILTAFKN QITKIENKIV
ALIESCPDYQ AKNCILQSMK GIGKIASASI ISNLPELGYM TNKQASALVG VAPMNRESGR
YKGLRKIQGG RHQVRTVLYM AMMSAIQSNP VFKETYQRLV AAGKPKKVAI IACIRKMVVI
LNSMLRDGVM WEAPKTTN
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