Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3750 |
Symbol | |
ID | 4175530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4519114 |
End bp | 4520280 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638056780 |
Product | iron-containing alcohol dehydrogenase |
Protein accession | YP_663306 |
Protein GI | 109900051 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.674727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCA CGATTACTCT ACCCAACATC ATGCAAATTG GCGCAGGCGC CATTAACGCT CTACCCGCGA CCCTTGAAAG CCTTGGCTGC CAATACCCGT GCATCATCAC CGACGCCACT ATGGTCACCC TTGGCTATAC CGATAAGATC ACTACCTTAC TAAAAGCGCA AAACATAGAT TACGGCCTAT TTAGCGAGAC CATGGCTGAG CCAAGTGAAG ATTCCATCCT GCCTGCGGTC CATTTGGTTC GTCAGGGAAG GTACGATTGC TTGCTAGCAT TAGGGGGCGG CAGCGCCATT GATACTGCCA AAGCGATTGC ATTATTAGCG ACCCACGGCG GCACCATGCG CGATTACAAA ATGCCCCGCA CGGTTCATAT GCGTAGCATG CCAGTGATTG CTATTCCTAC CACCGCAGGC ACCGGCTCAG AAGCGACCCA AGCCACCATC ATTACCGATG CCAGCACAGA CGAGAAAATG CTATGCATGG GGCCAGGCTT GATGCCCATG GCTGCCATAG TGGATTACGA ACTCACCCTG AGCTTGCCCA TGCGCATAGC GGCTGATACA GGCATTGATG CACTCACCCA TGCAATAGAA GCCTTTGTCA GTCGCAAAGC GAATCTGTTT AGCGATCAGC AGGCCATCGC CGCCATGAAA CTCATTGGGC AGAATTTACT GCGCACCTGT CAAGACCCGA CAGATTTTCA AGCCCGGGAA GCCGTTATGC TCGGGGCGAC CCTTGCTGGT GTCGCCTTTT CAAACGCCTC TGTTGCCTTA GTGCATGGTA TGAGCCGCCC ATTGGGGGTG CATTTTCATG TCCCCCATGG GCTAAGTAAT GCCATGTTAC TGCCCACTGT CACGGAATTT TCCATCAGCA GCGCCCCTAC ACGCTATGCC CAGTGCGCAC TGTATATGGG ATTGGTGAAT GACTTTGCAG ATGAAAACCA AGCGCACCAA GCACTGCTTA GCCAACTTAG GCTTATTAAT ACGACATTGA AGGTTCCAAC GTTAGCGGAG TTTGGCGTAC AAAAAGATAT GTTCAATAAC ACCTTGGCGT TAATGGCAGA GCAAGCTCTT GCCTCGGGCT CGCCGAACAA CAACCCACGC TTGGCGAGTA AAGATGAAAT CATCGCGTTG TATAAAACCG CTTGGGATAG TAAATAG
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Protein sequence | MTTTITLPNI MQIGAGAINA LPATLESLGC QYPCIITDAT MVTLGYTDKI TTLLKAQNID YGLFSETMAE PSEDSILPAV HLVRQGRYDC LLALGGGSAI DTAKAIALLA THGGTMRDYK MPRTVHMRSM PVIAIPTTAG TGSEATQATI ITDASTDEKM LCMGPGLMPM AAIVDYELTL SLPMRIAADT GIDALTHAIE AFVSRKANLF SDQQAIAAMK LIGQNLLRTC QDPTDFQARE AVMLGATLAG VAFSNASVAL VHGMSRPLGV HFHVPHGLSN AMLLPTVTEF SISSAPTRYA QCALYMGLVN DFADENQAHQ ALLSQLRLIN TTLKVPTLAE FGVQKDMFNN TLALMAEQAL ASGSPNNNPR LASKDEIIAL YKTAWDSK
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