Gene Patl_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3750 
Symbol 
ID4175530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4519114 
End bp4520280 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content52% 
IMG OID638056780 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_663306 
Protein GI109900051 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.674727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCA CGATTACTCT ACCCAACATC ATGCAAATTG GCGCAGGCGC CATTAACGCT 
CTACCCGCGA CCCTTGAAAG CCTTGGCTGC CAATACCCGT GCATCATCAC CGACGCCACT
ATGGTCACCC TTGGCTATAC CGATAAGATC ACTACCTTAC TAAAAGCGCA AAACATAGAT
TACGGCCTAT TTAGCGAGAC CATGGCTGAG CCAAGTGAAG ATTCCATCCT GCCTGCGGTC
CATTTGGTTC GTCAGGGAAG GTACGATTGC TTGCTAGCAT TAGGGGGCGG CAGCGCCATT
GATACTGCCA AAGCGATTGC ATTATTAGCG ACCCACGGCG GCACCATGCG CGATTACAAA
ATGCCCCGCA CGGTTCATAT GCGTAGCATG CCAGTGATTG CTATTCCTAC CACCGCAGGC
ACCGGCTCAG AAGCGACCCA AGCCACCATC ATTACCGATG CCAGCACAGA CGAGAAAATG
CTATGCATGG GGCCAGGCTT GATGCCCATG GCTGCCATAG TGGATTACGA ACTCACCCTG
AGCTTGCCCA TGCGCATAGC GGCTGATACA GGCATTGATG CACTCACCCA TGCAATAGAA
GCCTTTGTCA GTCGCAAAGC GAATCTGTTT AGCGATCAGC AGGCCATCGC CGCCATGAAA
CTCATTGGGC AGAATTTACT GCGCACCTGT CAAGACCCGA CAGATTTTCA AGCCCGGGAA
GCCGTTATGC TCGGGGCGAC CCTTGCTGGT GTCGCCTTTT CAAACGCCTC TGTTGCCTTA
GTGCATGGTA TGAGCCGCCC ATTGGGGGTG CATTTTCATG TCCCCCATGG GCTAAGTAAT
GCCATGTTAC TGCCCACTGT CACGGAATTT TCCATCAGCA GCGCCCCTAC ACGCTATGCC
CAGTGCGCAC TGTATATGGG ATTGGTGAAT GACTTTGCAG ATGAAAACCA AGCGCACCAA
GCACTGCTTA GCCAACTTAG GCTTATTAAT ACGACATTGA AGGTTCCAAC GTTAGCGGAG
TTTGGCGTAC AAAAAGATAT GTTCAATAAC ACCTTGGCGT TAATGGCAGA GCAAGCTCTT
GCCTCGGGCT CGCCGAACAA CAACCCACGC TTGGCGAGTA AAGATGAAAT CATCGCGTTG
TATAAAACCG CTTGGGATAG TAAATAG
 
Protein sequence
MTTTITLPNI MQIGAGAINA LPATLESLGC QYPCIITDAT MVTLGYTDKI TTLLKAQNID 
YGLFSETMAE PSEDSILPAV HLVRQGRYDC LLALGGGSAI DTAKAIALLA THGGTMRDYK
MPRTVHMRSM PVIAIPTTAG TGSEATQATI ITDASTDEKM LCMGPGLMPM AAIVDYELTL
SLPMRIAADT GIDALTHAIE AFVSRKANLF SDQQAIAAMK LIGQNLLRTC QDPTDFQARE
AVMLGATLAG VAFSNASVAL VHGMSRPLGV HFHVPHGLSN AMLLPTVTEF SISSAPTRYA
QCALYMGLVN DFADENQAHQ ALLSQLRLIN TTLKVPTLAE FGVQKDMFNN TLALMAEQAL
ASGSPNNNPR LASKDEIIAL YKTAWDSK