| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3748 |
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| Symbol | gltB |
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| ID | 4175528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4512978 |
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| End bp | 4517444 |
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| Gene Length | 4467 bp |
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| Protein Length | 1488 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056778 |
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| Product | glutamate synthase subunit alpha |
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| Protein accession | YP_663304 |
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| Protein GI | 109900049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.956068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAT ATAATCCTAA TGATTCCAAA GACAACTGTG GATTTGGTCT AATCGCCCAT
ACCCAAGGCG AAGCCAGCCA CAAGCTTGTC ATCACTGCAA TTGAAGGATT GGATCGCATG
CAGCACCGTG GTGGTATCGC CGCCGACGGT AAGACCGGGG ATGGTTGCGG CTTGCTACTT
CAAAAACCGG ATGCGTTCTT TAAAGAAATA GCCGCTGAAA ACGGTTGGAA ATTAAGTAAA
AAATACGGTG TAGGGGTTAT TTTCCTCAAT CAGGACGACA CCTTAGCGGC CCGTGGCCGT
GAAATTTTGA ACGAAGAGCT AGAACGCGAA ACATTGAGCG TTGCTGGCTG GCGTGTGGTA
CCGACAGATC ACTCTGTACT AGGTGATTTA GCCGCTTCAG GTGTTCCACA AATTGAGCAC
GTTTTTGTTA ATGCGCCTTC TGGATGGCGC AAACGAGACT TAGAACGCCG CTTATTTATG
GCACGTCGCC GCGCTGAAAA GCGCATGAGC GAAGACAGCG AATTTTACAT CGCTTGCTTA
TCCACGCTTG TGACTGTGTA TAAAGGCCTT GTTATGCCAA AAGATTTGCC AAAGTTCTAT
TTAGACTTGG CAGATGAGCG CATGCAATCG GCGATTTGTG TATTCCACCA ACGCTTCTCC
ACTAATACTT TGCCTAAGTG GCCATTGGCG CAGCCTTTCC GCTTCTTAGC TCATAATGGT
GAAATTAACA CTATTCGTGG TAACCGTGAT TGGGCGCAAG CTCGAAGCAG CAAATTCGTT
ACCCCGTTGT TGCCTGATTT AGCCGATGCA GCCCCCTTTG TGAATACTGA AGGCTCAGAT
TCGTCTTCAT TAGATAACAT GCTTGAGCTG TTCCTCGCTG GCGGTATGGA TTTATTCCGC
GCTATGCGCT TACTTGTGCC ACCTGCATAT CAAAACAACA GCACCATGGA CGACGAGTTA
CGCGCGTTTT ACGAGTTTAA CTCCATGCAC ATGGAGCCAT GGGACGGCCC CGCCGGTATC
GTATTAACCA ATGGTCGTCA CGTTGCCTGT AACTTGGACC GTAACGGTCT GCGTCCTGCA
CGTTATGTCA TCACCAAAGA TGGTTTAATC ACTCTTGCCT CTGAAATTGG TATATGGGAT
TACAAACCTG AAGACGTGGT CGAGAAAGGC CGTGTAGGCC CAGGTGAAAT GCTGGCGGTT
GATACCTACA ACGGCAAAAT TTGGCGTTCT AACGAAATTG ATGAAGAGCT CAAAAGCCGC
CATCCTTATC GCGAATGGAT CGACGAAAAC ATTCGTCGCT TAACGCCTGT GGAGCAATGC
GATGCCTCAT TAATTGGTCA ACGTGTGTTT GACGACAACA TGATGGCCAC GTACCACAAG
CTGTTCGCCT ACAGCTACGA AGAGCTTCAG CAAATTGTTA AAGTGCTTGC GAAAGATGGT
CAAGAAGCGG TGGGTTCAAT GGGTGATGAC ACCCCAATGG CCGTGCTTTC GTCAAAACAG
CGCACCATTT ACGATTATTT CCGTCAGCAG TTTGCTCAGG TCACTAACCC GCCTATCGAT
CCACTACGTG AAAATCACGT TATGTCGTTA GCCACGTGTA TTGGCCGTGA ACAAAACGTC
TTTAGTGAAA CCTCAGGTTA CGCTCATCGT GTATTGTTTG ACTCACCCGT ATTAATTTAT
ACCGATTTAA AGCAACTGCG CGAATACAAT GCTGAGCATT ACTATTCTGA AGTGGTTGAC
CTAAACTACA AGCCAGAAGA AGGTCTGAAA AAAGCCATCT CTCGAATTTG TAATGAAGTC
GAATATTTGG TCAAAACTAA ACGTGCTGCG TTTGTTATCT TGTCTGATCG CAATGTCAAA
GCGAACCGCT TAACCATCCC TGCAGCCATG GCTGTTGGTG CGGTGCAACG TCGCTTAATC
GACAAATCAC TTCGTTGTGA CGCCAACATA GTCGTTGAAA CCGCATCGGC TCGCGACCCA
CACCACTTTG CCGTATTGCT AGGCTTAGGT GCTACTGCGA TTTATCCGTT CTTAGCGTAT
GAATCTATCG AGCAAATGGC AGATAAAGGT GAACTTGGCG TCAGCGCTAT GCAAGGCGTG
TTGAACTACC GTAAAGGCAT CAATAAAGGT CTGTACAAGA TCATGTCTAA AATGGGGATC
AGCACCATTG CCAGCTACCG TAGCTCAAAG TTATTTGAAG CCATTGGTAT CAATGCTGAC
GTCACCAAGA TGTGCTTCCA AGGCGTGCCA AGTCGTTTAC AAGGCGCTGG TTTTGAAGAC
TTCGAACAAG ACCAAATTAA CTTAAGCCGT GTGGCGTGGT TAAAACGCAA GCCTGTCGAT
CACGGTGGTT TATTAAAATA CGTGCATGGC GGTGAGTATC ACGCTTATAA CCCAGACGTT
GTCACCAGCT TACAAAAAGC GGTTGTCAGT GGTAAGTACG ACGATTATCG CGTGTTTAGT
ACTCTGGTGA ATGAACGCTC CCCCAGTCAC TTCCGTGATT TGCTTGCCCT TAAAGCGCAA
AATCCAGCAA TTGATATTAG CGAAGTTGAA CCGGCTGAAA ACTTATTCAA GCGTTTCGAT
ACCGCTGCTA TGTCAATCGG AGCACTGAGC CCTGAGGCTC ACGAAGCCTT GGCGATTGCG
ATGAACCGCT TAGGTGGCAA ATCAAACTCA GGTGAGGGCG GTGAAGATCC AGCGCGTTTC
AACACTGAGA AAAACTCCAA GATCAAGCAA GTCGCATCCG GTCGCTTTGG GGTCACGCCG
CATTACTTAG TCAATGCTGA AGTGATTCAA ATCAAAGTCG CCCAAGGTGC CAAGCCAGGT
GAAGGTGGTC AGTTACCGGG TGACAAGGTC AACAGCTACA TCGCAGAGCT ACGCTTTGCC
GTGCCAGGCG TGACGCTTAT TTCACCGCCG CCTCATCACG ATATTTACTC TATCGAAGAT
TTAGCTCAGT TAATTTTTGA CTTGAAACAA GTTAACCCGA CTGCACAAAT TTCAGTGAAA
TTAGTATCTG AGCCGGGCGT GGGAACCATC GCTACCGGTG TTGCTAAAGC CTATGCCGAT
TTGATTACCA TTTCAGGTTA TGACGGCGGC ACAGGTGCGA GCCCACTAAC GTCTGTTAAG
TATGCTGGTA GTCCGTTTGA GCTTGGCCTT GCTGAAACCC AACAAGCGCT GGTTGAAAAC
GGTTTACGCC ACAAAGTACG CGTACAAACC GACGGCGGCC TTAAAACCGG TCTAGATGTA
ATAAAAGGCG CCATTTTAGG GGCTGAAAGC TTCGGCTTTG GTACTGGCCC AATGGTGGCG
TTAGGGTGTA AATACCTAAG AATTTGCCAC CTGAACAACT GTGCGACAGG CGTAGCAACT
CAAGACGAAA AACTACGGGA AAACTACTTC ATTGGTTTAC CCGAAATGGT AATGAACTAC
TTCAAGTTTA TTGCCGAAGA AGTGCGTGAA ATCATGGCAT CTATTGGTGT AACCAAGCTT
GATGACTTGA TTGGGCGTAC GGAATTGCTT GAAATACTGC CTGGTGTAAC CGCCAAGCAA
AGCCATTTGG ACTTAAGCCC TATTTTGGCT AAGCCAAAAG CGGGTACGCA TACCAAGTTG
TTCTGTTCAG AAATTGCCAA TAACCCTCTG GATAAAGGCG ACTTGAACGT ACAAATTTTA
AATGACGCTC AAGGTGCCGT CGCTTCATTG CGCGGTGCAT CGTTAAAGTA CAACGTTCGC
AACACTGACC GTTCAGTGGG AGCCATGCTC TCTGGTGCAA TTGCTAAAGT ACATGGCAAC
CAAGGCATGC ACGACGCGCC TATTCACATT CAGCTTACCG GTACAGTCGG TCAAAGCTTT
GGTGTATGGA ACGCAGGTGG CCTTGAAATG CACTTAGTGG GCGATGCCAA CGATTATGTA
GGCAAAGGCA TGACAGGCGG TAAATTGGTT ATCAGTAACC CAACCAACAT CAGCTTTGAC
CCACATGTGA GCGCGATAAT GGGTAACACT TGTTTGTACG GTGCAACAGG CGGCAAATTG
TTCGCTGCGG GACGTGCAGG TGAGCGCTTC GGTGTCCGTA ACTCAGGTGC TGTCGCGGTT
GTAGAAGGTA CAGGCGACAA CGCGTGTGAA TACATGACAG GCGGTATTGT TGCGGTCCTT
GGCGCCGTTG GCGTTAACTT TGGTGCAGGT ATGACAGGTG GTTTTGCCTA CATTCTGGAT
GTATTAGACG ATATTGAACA TCGTATCAAC CCTGAACTAG TGGAGATTAT GGGCATTGAA
GACAAGGTTA TTTTGTCTGA GCACTTGCGT GGCCTCATCA ATCAACACTA CGAAGAAACA
GGCAGCGAGT ACGCCATGGG CTTACTCAAC AACTTCAATG AAGTGTTGTC TAAATTCCGC
TTAATTAAGC CTAAGACCAG TAATGTGAAA AATCTGTTGG GGCACATTAG TCGCTCATCA
TCAGAACTTA GCATTCAGGC CCAATAA
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| Protein sequence | MSLYNPNDSK DNCGFGLIAH TQGEASHKLV ITAIEGLDRM QHRGGIAADG KTGDGCGLLL
QKPDAFFKEI AAENGWKLSK KYGVGVIFLN QDDTLAARGR EILNEELERE TLSVAGWRVV
PTDHSVLGDL AASGVPQIEH VFVNAPSGWR KRDLERRLFM ARRRAEKRMS EDSEFYIACL
STLVTVYKGL VMPKDLPKFY LDLADERMQS AICVFHQRFS TNTLPKWPLA QPFRFLAHNG
EINTIRGNRD WAQARSSKFV TPLLPDLADA APFVNTEGSD SSSLDNMLEL FLAGGMDLFR
AMRLLVPPAY QNNSTMDDEL RAFYEFNSMH MEPWDGPAGI VLTNGRHVAC NLDRNGLRPA
RYVITKDGLI TLASEIGIWD YKPEDVVEKG RVGPGEMLAV DTYNGKIWRS NEIDEELKSR
HPYREWIDEN IRRLTPVEQC DASLIGQRVF DDNMMATYHK LFAYSYEELQ QIVKVLAKDG
QEAVGSMGDD TPMAVLSSKQ RTIYDYFRQQ FAQVTNPPID PLRENHVMSL ATCIGREQNV
FSETSGYAHR VLFDSPVLIY TDLKQLREYN AEHYYSEVVD LNYKPEEGLK KAISRICNEV
EYLVKTKRAA FVILSDRNVK ANRLTIPAAM AVGAVQRRLI DKSLRCDANI VVETASARDP
HHFAVLLGLG ATAIYPFLAY ESIEQMADKG ELGVSAMQGV LNYRKGINKG LYKIMSKMGI
STIASYRSSK LFEAIGINAD VTKMCFQGVP SRLQGAGFED FEQDQINLSR VAWLKRKPVD
HGGLLKYVHG GEYHAYNPDV VTSLQKAVVS GKYDDYRVFS TLVNERSPSH FRDLLALKAQ
NPAIDISEVE PAENLFKRFD TAAMSIGALS PEAHEALAIA MNRLGGKSNS GEGGEDPARF
NTEKNSKIKQ VASGRFGVTP HYLVNAEVIQ IKVAQGAKPG EGGQLPGDKV NSYIAELRFA
VPGVTLISPP PHHDIYSIED LAQLIFDLKQ VNPTAQISVK LVSEPGVGTI ATGVAKAYAD
LITISGYDGG TGASPLTSVK YAGSPFELGL AETQQALVEN GLRHKVRVQT DGGLKTGLDV
IKGAILGAES FGFGTGPMVA LGCKYLRICH LNNCATGVAT QDEKLRENYF IGLPEMVMNY
FKFIAEEVRE IMASIGVTKL DDLIGRTELL EILPGVTAKQ SHLDLSPILA KPKAGTHTKL
FCSEIANNPL DKGDLNVQIL NDAQGAVASL RGASLKYNVR NTDRSVGAML SGAIAKVHGN
QGMHDAPIHI QLTGTVGQSF GVWNAGGLEM HLVGDANDYV GKGMTGGKLV ISNPTNISFD
PHVSAIMGNT CLYGATGGKL FAAGRAGERF GVRNSGAVAV VEGTGDNACE YMTGGIVAVL
GAVGVNFGAG MTGGFAYILD VLDDIEHRIN PELVEIMGIE DKVILSEHLR GLINQHYEET
GSEYAMGLLN NFNEVLSKFR LIKPKTSNVK NLLGHISRSS SELSIQAQ
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