Gene Patl_3744 details

Gene Information

• Locus tag: Patl_3744
• Symbol: rplI
• ID: 4175524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4508663
• End bp: 4509115
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638056774
• Product: 50S ribosomal protein L9
• Protein accession: YP_663300
• Protein GI: 109900045
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00940058
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATCA TACTACTAAA CAAAGTCGCC AACCTGGGCG GCTTGGGTGA CAATGTCACT 
GTAAAATCAG GCTATGCACG TAACTTCTTG TTCCCTCAAG GACAAGCTGT TCCTGCTACT 
AAAGCAAACG TAGAAAAATT TGAAGCACGT CGTGCAGAGC TTGAAGCAAA AATTGCTGAG 
CAGCTTGCAG CGGCAGAAGC TCGTGCAGCG AAAGTTGCTG AGTTGGCTGA AGTGACTATC 
GCTTCACCTG CTGGTGACGA AGGCAAATTG TTCGGATCTG TCGGTACTCG CGACATCGCA 
TTGGCAATTA CTGCCGCTGG TGTTGAGATT GCTAAATCTG AAGTTAAATT GCCTACTGGT 
ACTTTACGTG AAACTGGCGA GTTCGAAATC GACCTACAGT TGCACTCAGA AGTAACGGCC 
ACAATCAAAT TGGTTATTAT TCAAGAAGCT TAA 

 

Protein sequence

MEIILLNKVA NLGGLGDNVT VKSGYARNFL FPQGQAVPAT KANVEKFEAR RAELEAKIAE 
QLAAAEARAA KVAELAEVTI ASPAGDEGKL FGSVGTRDIA LAITAAGVEI AKSEVKLPTG 
TLRETGEFEI DLQLHSEVTA TIKLVIIQEA