Gene Patl_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3743 
Symbol 
ID4175523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4507858 
End bp4508589 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content46% 
IMG OID638056773 
ProductMOSC domain-containing protein 
Protein accessionYP_663299 
Protein GI109900044 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00289398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGCA GGTTACCTCA CAAAGGTTTA AAGCTACAAA AAAGAAATGC GAATGAGTAC 
AACGGGTTTA GCGACAATGA CAACGAGAGC GATATGAAAG TACTAGGTTT ATTTGCAGGT
GTTACCCGCC CCATCGGCCC CAAACACGCC CCGTCAGGCA TTGATAAGCG ACCAGTCAAG
CGCGCAGAGG TAAATCACCT TGGTATTGTC GGTGACGTTC AGGTTGATAA ACGCTACCAC
GGTGGCCCTG AGCGCGCTTT ACACCAATAT TCTCTGCATG GTTACGAAAC GATAATAAAG
CGCCACCCTT TGATGCACAG GACCGTGGTA ATGGGCTCCA TTGGTGAAAA CCTTGCAAGC
ACCGATATGC ATGATAAAAA CGTCAACATT GGCGATATAT ATCGCGTTGG CGAAATTACA
GTGCAGGTGA CTTCCCCGCG CATTCCCTGC TGGAAGATTG AAGAAAAACT GAATCAAAAA
GGCTTAGTCG AGCTCATTAA AAACCAGCAG ATCACAGGTT GGTACTATCG CGTGCTTGAA
AACGGGGTAA TTACATTAGG AGACAGCATC ACACTTGTTG AGCGTCCCAA TGCAACTTTA
TCAGTGGCAT CTTTTGTTCA ACAGCACTTT GACCAAAACA CCTCAGCGGA TTCACTACGC
CAAATGAGCA ATGCGATAGG CTTAGACTCA GAATGGCAAC AAAAACTGCT ACGCCGTATC
GATAATCAAT AA
 
Protein sequence
MSRRLPHKGL KLQKRNANEY NGFSDNDNES DMKVLGLFAG VTRPIGPKHA PSGIDKRPVK 
RAEVNHLGIV GDVQVDKRYH GGPERALHQY SLHGYETIIK RHPLMHRTVV MGSIGENLAS
TDMHDKNVNI GDIYRVGEIT VQVTSPRIPC WKIEEKLNQK GLVELIKNQQ ITGWYYRVLE
NGVITLGDSI TLVERPNATL SVASFVQQHF DQNTSADSLR QMSNAIGLDS EWQQKLLRRI
DNQ