| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3738 |
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| Symbol | rplU |
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| ID | 4175518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4504165 |
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| End bp | 4504476 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056768 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_663294 |
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| Protein GI | 109900039 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000915025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCGG TTTTCCAAAG TGGTGGCAAA CAACACCGTG TGGCTGAAGG CCAAACCGTT
CGTCTAGAGA AGATCGAAGT GGCTCCAGGT GAGTCAGTAG AATTCGGTGA TATCTTGATG
GTGAGCAATG GTGAAGATGT TAAGATCGGT ACGCCTTTTG TAAGTGGCGG AAAAGTTACT
GCTGAAGTAG TAACACATGG TCGTGGCGAG AAAGTTAAGA TTGTTAAGTT TCGTCGACGC
AAGCATTCAC GTACCCAAAT GGGTCACCGT CAGTGGTTCA CGGAAGTGAA AATCACTGGT
ATAAGCGCTT AA
|
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| Protein sequence | MYAVFQSGGK QHRVAEGQTV RLEKIEVAPG ESVEFGDILM VSNGEDVKIG TPFVSGGKVT
AEVVTHGRGE KVKIVKFRRR KHSRTQMGHR QWFTEVKITG ISA
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