| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3737 |
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| Symbol | rpmA |
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| ID | 4175517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4503892 |
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| End bp | 4504149 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638056767 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_663293 |
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| Protein GI | 109900038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000346028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAGGCTGG TGGTAGTACT AATAACGGTC GCGACTCAGA AAGTAAACGT
TTAGGTGTTA AACGTTACGG CGGTGAGTCA GTTTTAGCGG GTAACATTAT TGTTCGTCAA
CGTGGTACTC GTTTCCACGC TGGTAACAAT ATGGGTATCG GCAAAGATCA TACTTTGTTT
GCTTTATCAG ATGGTAAAGT TCAATTCGAA GTTAAAGGTC CTAAAAACCG TAAATTTGTA
AGTATCGTTG CTGAATAA
|
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| Protein sequence | MAHKKAGGST NNGRDSESKR LGVKRYGGES VLAGNIIVRQ RGTRFHAGNN MGIGKDHTLF
ALSDGKVQFE VKGPKNRKFV SIVAE
|
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