Gene Patl_3736 details

Gene Information

• Locus tag: Patl_3736
• Symbol: obgE
• ID: 4175516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4502525
• End bp: 4503718
• Gene Length: 1194 bp
• Protein Length: 397 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638056766
• Product: GTPase ObgE
• Protein accession: YP_663292
• Protein GI: 109900037
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0046392
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTG TAGATGAAGC TGAGATCCGC GTAGAAGCGG GTGATGGCGG AGCCGGTACG 
GTTAGTTTTC GCCGAGAGAA ATATGTTCCT GATGGCGGCC CGGACGGCGG CGATGGTGGT 
GACGGTGGAA GCGTCTACTT AGTTGCAGAT GAAAACCTAA ACACGCTTAT CGATTATCGC 
TTTGAGAGAT TTCATCGTGC TGAGCGCGGT AAGAATGGTC AAAGCGCTGA TTGTACTGGC 
CGTAAAGGAG CTGACCTAGA AGTCAAAGTA CCAGTAGGTA CTCGTGCAAC GGATACCGAG 
ACAGGTGAGC TATTGGGGGA TTTGACCAAG CATGGTCAGC GTCTAAAAGC AGCGCAAGGC 
GGCTATCACG GTTTAGGTAA TGCACGCTTT AAAACCAGTA CTAATCGCGC CCCACGTCAA 
AAAACACTAG GTACACCAGG CGATGTACGT ATGCTTAAGC TAGAGCTTAT GTTATTGGCT 
GACGTAGGTT TGCTGGGCAT GCCAAATGCC GGTAAATCTA CTTTTATACG TAGCGTCTCT 
GCTGCCAAGC CAAAAGTAGC GGATTATCCG TTTACCACAC TTGTGCCTAA TTTAGGTGTT 
GTGCGTTTAG ATGCCATGAG CAGTTTCGTG ATTGCTGATA TTCCTGGTTT GATTGAAGGT 
GCGTCTGAGG GGGCTGGTTT AGGGATTCAA TTCCTTAAAC ATCTTGAGCG CTGTCGGGTG 
TTGTTACACC TTATTGACTT GATGCCTGCC GATGGTTCAG ACCCAGTGGA TAACGCCAAA 
GCGATAGTGA CTGAGTTAGA AAAATACAGT CCTAAATTAG CCGCTAAACC ACGTTGGTTG 
GTGTTTAACA AAGTCGACTT GATGTTTGAA GACGAAGCAC AAGATCTGTG TAAAAAAATC 
GCGGATGCCA TGAACTGGGA AGGTGAATAT TACAGTATTT CCGCAGTGCA GGGCAAAAAC 
ACTAAAGAGT TATGCATCAA GGTAATGGAC TTTATTGAAA GTTTACCCGA AGACGCCATT 
GAAGAATCTG ATGACGAAGA AGTTGGCTTT AAATGGGATA CTTACCATAA AGAGACAGTG 
GAAAATTATG AAGACGACGA TGATTTTGAT GACGACGATG ATGATGACTT CGATGGAGAC 
GATGATGATG ACTTCGATGG AGACGACGAT TTCGAAGTGA TTTACCAAAA GTAA 

 

Protein sequence

MKFVDEAEIR VEAGDGGAGT VSFRREKYVP DGGPDGGDGG DGGSVYLVAD ENLNTLIDYR 
FERFHRAERG KNGQSADCTG RKGADLEVKV PVGTRATDTE TGELLGDLTK HGQRLKAAQG 
GYHGLGNARF KTSTNRAPRQ KTLGTPGDVR MLKLELMLLA DVGLLGMPNA GKSTFIRSVS 
AAKPKVADYP FTTLVPNLGV VRLDAMSSFV IADIPGLIEG ASEGAGLGIQ FLKHLERCRV 
LLHLIDLMPA DGSDPVDNAK AIVTELEKYS PKLAAKPRWL VFNKVDLMFE DEAQDLCKKI 
ADAMNWEGEY YSISAVQGKN TKELCIKVMD FIESLPEDAI EESDDEEVGF KWDTYHKETV 
ENYEDDDDFD DDDDDDFDGD DDDDFDGDDD FEVIYQK