| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3735 |
|---|
| Symbol | |
|---|
| ID | 4175515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4501891 |
|---|
| End bp | 4502406 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056765 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_663291 |
|---|
| Protein GI | 109900036 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0124901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA TAGCTATGGT TGCTGCAATG GCAAACCAAC GAGTCATTGG TCTTAATAAT
CAGATGCCTT GGCATATGCC TGCAGATCTA AAACACTTTA AACGTATCAC CTTAGGCAAG
CCAATTGTGA TGGGGCGAAA AACGTACGAA TCAATTGGCA GGGCTTTACC CGGCCGCCTC
AATATTGTTA TCACTAGCGA TCAGAACTAT CAACTGGCAG ATGCGAGCAT TGTACATAGT
TGTGAGCAAG CAATTGCTGT AGCCACGTCA CATATGCAAA ATGACGGAAT GCCAGAGCAC
GACCAAGAAG TGATGGTCAT TGGCGGGGGA ACGGTTTATC AGCATTTTTT GCCCCACGCT
AATCGTTTAT ATTTGACCTT TATTGATCTA GATACCCCAG GGGACACTTA CTTTCCAAAT
TACTCGGATG GTGCATGGCA AGAGATTGAA AGTGAATCTA ACGACCCTGA TGAGAAAAAC
CCCCATTCAT ATCGCTTTGT TACCTTAGCT AGGTAA
|
|---|
| Protein sequence | MAKIAMVAAM ANQRVIGLNN QMPWHMPADL KHFKRITLGK PIVMGRKTYE SIGRALPGRL
NIVITSDQNY QLADASIVHS CEQAIAVATS HMQNDGMPEH DQEVMVIGGG TVYQHFLPHA
NRLYLTFIDL DTPGDTYFPN YSDGAWQEIE SESNDPDEKN PHSYRFVTLA R
|
|---|
| |