Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3731 |
Symbol | |
ID | 4175511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4497460 |
End bp | 4498191 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638056761 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_663287 |
Protein GI | 109900032 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTG TAACTTACAA TATTCACAGC GGCGTTGGGG TTGATAAAGT GCAAAGCTAC GCACGTATAG GGCAGTTTTT GGCGAGTCAG TGTGTAGATA TTGCGCTAAT CCAAGAAATG GACACGCGGC CGCCCGAGCG CAGCATTCAG GATGATGTTG AACAAATATG TGCAGGGCAC TTTACTCAGC TTATCTCGTC ACCCGCTTTG CAAGAATCCA GCGGTTGGTA TGGAAACGCT GTCCTGAGCC GTTATCCGGT ACTATCCAAA AGAACCTTGG ATGTCAGTCA AAGCGGCTTT CAGCCGCGTA ATATTCAAGA GGTGGTCTTG GACACAAGTT TAGGCCCCCT TAGAGTCATA AACACCCACA AGGGACTGAA GAAACAAGAG AGACGCAAGC AATTTGCCTT GCTTGCTGAG TACCTACGGG AAAAGATGGC GGGCTCGAAA ATACCCATAG TGTTAGGGGG AGACTTTAAC GAATGGCAAT TTATGACCAA GGCGTTCAAA GATATTAACC AAGTCTTAAA TGAAAACCCC GTTCGAGCGA CTTTCCCCGT CGCGTGGCCG CTGTTTAGGT TGGACCGGTT GTGGACATCC TTTGACTTAA GCCTTATGAA GAAGCGGGAT GCTAACATCA GTAGTATCAG CGCAAGCGTG CTCAAAACGC CACAGACACG TCAGTTTTCA GATCACTATC CGATTTTGCT AGACATAGCA CAAAGGCAAT AG
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Protein sequence | MRIVTYNIHS GVGVDKVQSY ARIGQFLASQ CVDIALIQEM DTRPPERSIQ DDVEQICAGH FTQLISSPAL QESSGWYGNA VLSRYPVLSK RTLDVSQSGF QPRNIQEVVL DTSLGPLRVI NTHKGLKKQE RRKQFALLAE YLREKMAGSK IPIVLGGDFN EWQFMTKAFK DINQVLNENP VRATFPVAWP LFRLDRLWTS FDLSLMKKRD ANISSISASV LKTPQTRQFS DHYPILLDIA QRQ
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