| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3718 |
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| Symbol | |
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| ID | 4175498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4479376 |
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| End bp | 4480059 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056748 |
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| Product | hypothetical protein |
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| Protein accession | YP_663274 |
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| Protein GI | 109900019 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAACAA TAGCAGAACG ACTTAAAATC GCACTGAAAA CAATCACTCA GAGTGTTTGT
GATGCTAATC GTCCAGCAAA TTCAGTCAAA TTACTAGCCG TAACCAAAAC CAAACCCGTA
TCAGATATCG TGCAAGCGTA TGAAGCGGGA CACCGTTTAT TTGGTGAAAA TTATGTACAA
GAAGGTGTCG GCAAGATTCA GCAGCTCAGG GAATTAAGCG ATATTGAATG GCATTTTATC
GGCCCTTTGC AATCAAACAA GACCCGCCCT GTGGCTGAAA ACTTCGATTG GGTGCACAGC
ATCGACCGCT TGAAAATCGC CCAGCGATTA AACGACCAAC GTAGTGCTCA TAAAAAACTA
AACGTGTGTA TTCAAGTTAA TGTTGATAAT GAGAGTAGTA AGGCGGGTGT GGCAGTGGAT
GAAGTCAGTA CGTTGGCTGA GCAAATCAGT GTCATGCCTA ATTTAGCGTT ACGCGGGCTG
ATGACGATCC CAAAGGCACA ACAAAATGAT GGTATGCAGC GTAAAAGTCT GTTGGTGATG
AACGAGCTAT TCTTACAACT ACAGACAAAA TATCCGCAAA TTGATACCCT AAGTATGGGA
ATGTCAAACG ATATGCAACT TGCTATCGAA TGCGGTTCAA CCATGGTAAG GATCGGCAGC
GCTATTTTTG GTTCCCGTCA GTAA
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| Protein sequence | MGTIAERLKI ALKTITQSVC DANRPANSVK LLAVTKTKPV SDIVQAYEAG HRLFGENYVQ
EGVGKIQQLR ELSDIEWHFI GPLQSNKTRP VAENFDWVHS IDRLKIAQRL NDQRSAHKKL
NVCIQVNVDN ESSKAGVAVD EVSTLAEQIS VMPNLALRGL MTIPKAQQND GMQRKSLLVM
NELFLQLQTK YPQIDTLSMG MSNDMQLAIE CGSTMVRIGS AIFGSRQ
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