Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3713 |
Symbol | |
ID | 4175493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4474995 |
End bp | 4475780 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638056743 |
Product | thiol:disulfide interchange protein DsbC |
Protein accession | YP_663269 |
Protein GI | 109900014 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT TTTTCCCTAT TAGGGTCTTA TCTTTATCTG TTCAAGTTGG AATTTATATG AAATATCGTG CGTTATTTGT GGCTGCTTTT GCCTTTTTAT CGGTCAGCCT GAGTGTTAGT GCTGCATCAG GTAGCAGTCA AAACCTTGAT AGTGTTAAGC AAAAAATTCA AATGTCATTA GGCATGCAAG TCACGTCTAT TGGCGATGCG CCGGTTCCAG GCTTATTACA AGTACAAACT GATAAAGGCT TGTTTTACAC CAGTGACGAT GGCAAATATT TCCTTCAAGC CCGTATATTT AATCTAGATG AAGGCATGCG TAACGAGACA GAAACAACAT TGACCAAAAT GCGTGTTGAT GGGGTGGAGC ACTTCAAAAA TTCTGTGATT GAATACAAAG CAGAGAAAGA AAAGTACGTG GTGAATGTGT TTACTGATAT TACCTGTGGA TATTGCCGTA AGTTGCATAA TCAAATGGAT GAATACAATG ATTTAGGCAT TACCGTTCGT TATTTAGCCT TTCCTCGCGC TGGCTTAAAC AGCAAGCCGT ATCAAGATAT GGTGTCAGTC TGGTGTTCAG CTAATCCGCA AAAAGCGTTA AATGAAGCGA AAGGCGGCGA AAACGTCGCT AAAGCAAGTT GTTCAAATCA AGTCGCTGAG CAGTATAATT TTGGTCAGAG TGTAGGTGTA AATGGTACGC CTAATATTAT TTTACCTGAT GGCAGCGTGG TGCCTGGCTA CCAACCACCG ATGCAATTAT TGCAAGCTAT TCAAGACGCC TCATAG
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Protein sequence | MKLFFPIRVL SLSVQVGIYM KYRALFVAAF AFLSVSLSVS AASGSSQNLD SVKQKIQMSL GMQVTSIGDA PVPGLLQVQT DKGLFYTSDD GKYFLQARIF NLDEGMRNET ETTLTKMRVD GVEHFKNSVI EYKAEKEKYV VNVFTDITCG YCRKLHNQMD EYNDLGITVR YLAFPRAGLN SKPYQDMVSV WCSANPQKAL NEAKGGENVA KASCSNQVAE QYNFGQSVGV NGTPNIILPD GSVVPGYQPP MQLLQAIQDA S
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