Gene Patl_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3704 
Symbol 
ID4175484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4466453 
End bp4467040 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content42% 
IMG OID638056734 
Productsignal transduction protein 
Protein accessionYP_663260 
Protein GI109900005 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000122502 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA TCGCCCTTTA CGAATTAAAC CAATTAGATG AATTAGCTTG GCCTGAAACG 
TTTCAAGGGG TTTCCCTTGA TTCCCCTGCA ACGTCAGTGT TTACTGATTT CAAAAAAACA
AAACCAATTG TCATTCAAGC TGATACGCCT ATCTCTGAAG TAGAGCAACG TATGATCGAA
GAGAAAGTAC GCTTGAAAAT TGTGCTTGAT AGCGCCTACA AGTTTATCGG CGTGATTAGC
CTTGACGACT TGAACGATCA AGAAAAAATA AAGCGCATTG CCTCTGGTAT TGAGCGCCCA
GACTTATGCG TTCGTCACTT TATGCGTACC AAAGCAGATC TAAAAGTGAT TTTATTGCGA
GAGTTGAAAC GCTCTAGTGT CGGTGATTTG GTCGAAATGC TCAAAGCCAA CGGTCTGCAG
CATTGTTTAG TCGTTGACAG CGAAGCGCAT CAGATCCGTG GCATCGTATC AGCCAGCGAC
TTAGCAAAAG GCTTAGGAAT TGCGATGAAC TTGAGTGTTA GCCCAACCTT TTTTGACATC
TTTAATGAAG TTTATAGTGA AGCGCCATTG TTTAAAGCCT ACGGTTAA
 
Protein sequence
MKNIALYELN QLDELAWPET FQGVSLDSPA TSVFTDFKKT KPIVIQADTP ISEVEQRMIE 
EKVRLKIVLD SAYKFIGVIS LDDLNDQEKI KRIASGIERP DLCVRHFMRT KADLKVILLR
ELKRSSVGDL VEMLKANGLQ HCLVVDSEAH QIRGIVSASD LAKGLGIAMN LSVSPTFFDI
FNEVYSEAPL FKAYG