Gene Patl_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3703 
SymbolrplM 
ID4175483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4465706 
End bp4466134 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content44% 
IMG OID638056733 
Product50S ribosomal protein L13 
Protein accessionYP_663259 
Protein GI109900004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000271958 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT TTGTTGCAAA GCCAGAAACG GTAAAACGTG AATGGTATGT GGTAGACGCC 
GCAGACAAAA CACTAGGTCG TTTAGCGACT GAAATTGCTA GCCGTTTACG CGGAAAGCAT
AAGCCTGAGT ACACACCTCA TGTGGACACA GGGGATTACA TTGTTGTGAT CAACGCAGAG
AAAGTAGTTG TTACCGGCAA CAAAGCCAAA GGTAAAATGT ACTACTCTCA CACTGGTTAC
CCAGGCGGTC TTAAAGAGAC TAACTTTGAG AAGTTACAAG CCTTCAAACC AGAGATGATC
ATTGAAAAAG CGGTTAAAGG TATGTTGCCA AAAGGTCCTC TTGGACGCGA TATGTTCCGC
AAAATGAAAG TCTTCGCTGG TCCTGAGCAT AAACACGCTG CTCAACAGCC TCAAGTCTTA
GACATTTAA
 
Protein sequence
MKTFVAKPET VKREWYVVDA ADKTLGRLAT EIASRLRGKH KPEYTPHVDT GDYIVVINAE 
KVVVTGNKAK GKMYYSHTGY PGGLKETNFE KLQAFKPEMI IEKAVKGMLP KGPLGRDMFR
KMKVFAGPEH KHAAQQPQVL DI