Gene Patl_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3701 
Symbol 
ID4175481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4464411 
End bp4465043 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID638056731 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_663257 
Protein GI109900002 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000347464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG TATCATTAGA TGCGAATGAT TCGTCTGTTA CCGAAAACCA ACCGCAAGAC 
AACAATCGAC GTCGCTTTTT GACTGTCGCT ACGTCCGTTG TGGGTGGTGT CGGTGTCGCA
GGTGCTGCTA TACCTTTCAT CGGTTCATGG AACCCCAGTG TGAAAGCGCG AGCAGCCGGT
GCTGATGTAG AAGCAGATAT AAGTAAAATC GAGCCTGGAC AGCTTATTCG CGTTATTTGG
CGTAGTAAGC CAGTTTGGAT CACCAGACGT ACACCAGAAT TGCTTGAATC GTTGACCAAA
ATTGATGATT TATTGAAAGA TCCAAATTCT GAAGAGGATC AACAACCTGA GTTCGCTCGT
AATTCATATC GTTCCATTAA AGCTGAATAC TCAGTGTTGG TTGGGATCTG TACTCACCTA
GGTTGCTCTC CTCAACATCT AAAAGATGGC GCTTTTGAAG AGTACGTTGA AGGCGTTCCT
GAAGGCTTCC ATTGCCCATG TCATGGTTCT AAATTTGATA TGGCTGGTCG CGTATTCAAT
AACGTTCCTG CACCACTTAA CTTGGTTGTT CCGCCGTATA TGTACTTGGA CGACAACACC
ATTTTGATTG GTTCCGAAGA AGGGGCTGCA TAA
 
Protein sequence
MSNVSLDAND SSVTENQPQD NNRRRFLTVA TSVVGGVGVA GAAIPFIGSW NPSVKARAAG 
ADVEADISKI EPGQLIRVIW RSKPVWITRR TPELLESLTK IDDLLKDPNS EEDQQPEFAR
NSYRSIKAEY SVLVGICTHL GCSPQHLKDG AFEEYVEGVP EGFHCPCHGS KFDMAGRVFN
NVPAPLNLVV PPYMYLDDNT ILIGSEEGAA