Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3701 |
Symbol | |
ID | 4175481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4464411 |
End bp | 4465043 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056731 |
Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_663257 |
Protein GI | 109900002 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000347464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATG TATCATTAGA TGCGAATGAT TCGTCTGTTA CCGAAAACCA ACCGCAAGAC AACAATCGAC GTCGCTTTTT GACTGTCGCT ACGTCCGTTG TGGGTGGTGT CGGTGTCGCA GGTGCTGCTA TACCTTTCAT CGGTTCATGG AACCCCAGTG TGAAAGCGCG AGCAGCCGGT GCTGATGTAG AAGCAGATAT AAGTAAAATC GAGCCTGGAC AGCTTATTCG CGTTATTTGG CGTAGTAAGC CAGTTTGGAT CACCAGACGT ACACCAGAAT TGCTTGAATC GTTGACCAAA ATTGATGATT TATTGAAAGA TCCAAATTCT GAAGAGGATC AACAACCTGA GTTCGCTCGT AATTCATATC GTTCCATTAA AGCTGAATAC TCAGTGTTGG TTGGGATCTG TACTCACCTA GGTTGCTCTC CTCAACATCT AAAAGATGGC GCTTTTGAAG AGTACGTTGA AGGCGTTCCT GAAGGCTTCC ATTGCCCATG TCATGGTTCT AAATTTGATA TGGCTGGTCG CGTATTCAAT AACGTTCCTG CACCACTTAA CTTGGTTGTT CCGCCGTATA TGTACTTGGA CGACAACACC ATTTTGATTG GTTCCGAAGA AGGGGCTGCA TAA
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Protein sequence | MSNVSLDAND SSVTENQPQD NNRRRFLTVA TSVVGGVGVA GAAIPFIGSW NPSVKARAAG ADVEADISKI EPGQLIRVIW RSKPVWITRR TPELLESLTK IDDLLKDPNS EEDQQPEFAR NSYRSIKAEY SVLVGICTHL GCSPQHLKDG AFEEYVEGVP EGFHCPCHGS KFDMAGRVFN NVPAPLNLVV PPYMYLDDNT ILIGSEEGAA
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