| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3689 |
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| Symbol | |
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| ID | 4175469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4453618 |
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| End bp | 4454910 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056719 |
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| Product | platelet-activating factor acetylhydrolase, plasma/intracellular isoform II |
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| Protein accession | YP_663245 |
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| Protein GI | 109899990 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4188] Predicted dienelactone hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT TTAATCCTAC TGCACTCCTT ACAGCACTGA CCATGATATC GGCGAGTTGC
TTCGTTCACG CGGACGAACA GCTATATACT GTCCAGCCAT CTATTACACC GGAACTTGCA
TTTGCAGGGC AATACACAGT TGGTGTGCAA ACGCTCAACG TAACCCACGA AAAGCAACTT
GATACGCAGA CGTTTACATC ACGTAAAGAC CGCCCACTGA CCTTAGAGGT GTGGTATCCA
GCCGATCCTA AAGCGACTGC AGCCTCAACT GCTACTTATG AAAACGTCAC CCGTCTGCAC
AAACCCTTTA GCTTAATAGG TACGGCTCAT CGAAACGCTG CTCCTCAATC ATCAGGTCAA
TTTCCTTTAG TTGTGCTGTC TCATGGTTAT ACTGGCTATC GAACGATCAT GTATTATCTT
GGTGAACATT TAGCCAGTCA TGGCTATATC GTTGTAGGTA TTGACCATAC AGACTCGACC
ACTGGGGATG TAGATTTCGT AAATTCAGGT TTCTCTGGTT TTCCTAGCAC TTTAATAAAC
CGGGCGCGGG ACCAGCAATT TGTGCTCGAT TATTTTAGCC AAGACAGTTC AGACATCGCT
AAGATCGCTG ATACCGACGA TGCAGCAGTC ATTGGCTATT CCATGGGCGG CTTTGGTGCA
ATCAATACTA TTGGTGCTTG CTACGACTTT CATCAAGAGG GGTTACAACG TCTGGGTTTC
CCTGAAGATG CGGCCAAACA ACTATTGCCG GTATTTAATA GTTGCAATGG GGGACGGGAG
TCAGTGGACC CTCGCTGGAA AGCGATGATT GCTTTCGCAC CTTGGGGCGG TGAAACCTCT
GTACATGATG CGAAATCGAT GGCGAATATT ACGGTTCCAA GTCTTTATGT ATCAGGGGAT
CAGGATGATG TATCCGGCTA TGAAGACGGT GTTAAAAAAC TTTTTGAACA AACCGGTAGT
GATAACAAGT ATCTGATGGT GTTTGAAAAT GCACGGCATA ACATTGCGCC ACATCCAGCA
CCTAAAGTGG CATATGAAAC TGACGCTGAC CTAGGCCATT ACATTGAGCC TAGTTGGGAC
AACGAGCAGC TTAACCGCAT CAATGAACAC ATGAGTTTGG CATTTTTAGA TTGTTTCGTG
AAAAATGACC AGAGCAAATG CGCCTACTTA CCCACGCGCG ACAATGCTAC TCAGATGAAA
GATAGTGACG GTAAACTTAG CGAGGCATGG CCAGGGTTCG CTGATCGCTG GGCAACAGGA
ATTCGCTTTT ACCGCGGCAA AAACGCCAAG TAG
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| Protein sequence | MKIFNPTALL TALTMISASC FVHADEQLYT VQPSITPELA FAGQYTVGVQ TLNVTHEKQL
DTQTFTSRKD RPLTLEVWYP ADPKATAAST ATYENVTRLH KPFSLIGTAH RNAAPQSSGQ
FPLVVLSHGY TGYRTIMYYL GEHLASHGYI VVGIDHTDST TGDVDFVNSG FSGFPSTLIN
RARDQQFVLD YFSQDSSDIA KIADTDDAAV IGYSMGGFGA INTIGACYDF HQEGLQRLGF
PEDAAKQLLP VFNSCNGGRE SVDPRWKAMI AFAPWGGETS VHDAKSMANI TVPSLYVSGD
QDDVSGYEDG VKKLFEQTGS DNKYLMVFEN ARHNIAPHPA PKVAYETDAD LGHYIEPSWD
NEQLNRINEH MSLAFLDCFV KNDQSKCAYL PTRDNATQMK DSDGKLSEAW PGFADRWATG
IRFYRGKNAK
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