| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3683 |
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| Symbol | |
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| ID | 4175463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4442429 |
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| End bp | 4443889 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056713 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_663239 |
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| Protein GI | 109899984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA ATATGGTTCA AGCGGCAGTA TTCGCATTGG TTACGGGCAT AATTGGCTTG
TTAACGTATT TGAAGTGCCG TGGACATGGA CATAACCAGC AAAGCCAAAA TAAGGAGTAC
TTTCTAGCTG GTGGTGGTTT AACGTGGATG TTTGTTGCGG GCTCTATCAC TTTAACTAAC
TTGAGTACCG ACCAACTTGT TGGCATGAAC GGCAACCAAA TGGCCTTGCT TGCATGGTGG
GAATTTGCCG CGGTTATTGG TTTGATTATT TTGGCTAAAG TGTTTATCCC CATTTATTAC
AAATACAATT GTACAACGAC CACAGAACTG TTGGAAAAAC GATATAAAAA CAAACATATA
CGTGCAGTGA TTGGGATGTT GTTTTTTCTA GGTAATGCGT TGATATACAT GCCTGCGGTC
ATTTATTCCG GCTCGTTGTT TATGCAAACC ATGTTCAATG TTGATATTCC ACTCATGTAT
ATCGCTATTG CGTTTGCTGC GCTGGGGGCT GTGTACGCTA TTTTCGGCGG TTTACGTGCG
GTAGCAGTGT CTGATACTTA TTCAGGTGTA TTATTACTTA CCATGGCAGT GTTAGTGGTG
TTCTTATCTC TTGCTGCTAT CGACTTCGAC TTTACAGGCA TTCCTGCAGA GCGTTTAACT
TTAGTGGGCG GCCCTGACTC ACCGTTACCT TGGCCAACAC TGCTTACCGG CATGATATTC
ATTCAAATGT ATTACTGGGG CACCAACCAA ACAATTACCC AGCGCGCTAT GGCTGCACCC
AATGTAAAAG AGGCGCAAAA AGGTGTGTTC GCAGCAGCTG CAATTCGTAT CCTAATTGTT
CCGGCAATTA TCGTTCTACC AGGTATTGTG TCGTTCAAAC TGTATGGCGA TATCGGTGAT
GCTGCATACG GACGTATCGT TGGCGATGTT ATGCCATTGT GGCTAACTGG TGTGTTTGCA
GCGGCGATGG CTGCGGCCGT ACTTTCAACC TACAACAGTT TATTGAACTC AGCGACGGCT
TTATACGTAT GTGATATTCA TGAGGCATAC GTTAACGATA ACCCTAACGT AGTGCGCTTA
AGTGGCTGGG TAACGGCTAT GTTGACAATA TTGTCCTTGG TACTGGTACC TATTTACCAG
CAAGCCGACA GTATCATTAA CTTGTTGCAA CAGTTAAATG GTTTATTAAG TATGCCAATA
TTGTCAATAT TCGTAGTTGG ATTGGTGTTC AAAGATGTTG ATGCACGAGC GGGCATTGCC
GCTGTGATAT TCGGCGTATT GCTTTACGGC TCACTGACTT TCGATTTCTC GCCTGTGTAT
ACGACGTTGC ACTACATCCA TCTTATGCCA ATCACTTTAG TGTCATGCAT CAGCTTCGCA
TTGTTCATTA ATCGTTTTGT ATTAGGACAA CGAGCAAAAT TAGCCTGGGG CAGTAACGAC
GGCCTCGAAG CAGCAAAATA A
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| Protein sequence | MSENMVQAAV FALVTGIIGL LTYLKCRGHG HNQQSQNKEY FLAGGGLTWM FVAGSITLTN
LSTDQLVGMN GNQMALLAWW EFAAVIGLII LAKVFIPIYY KYNCTTTTEL LEKRYKNKHI
RAVIGMLFFL GNALIYMPAV IYSGSLFMQT MFNVDIPLMY IAIAFAALGA VYAIFGGLRA
VAVSDTYSGV LLLTMAVLVV FLSLAAIDFD FTGIPAERLT LVGGPDSPLP WPTLLTGMIF
IQMYYWGTNQ TITQRAMAAP NVKEAQKGVF AAAAIRILIV PAIIVLPGIV SFKLYGDIGD
AAYGRIVGDV MPLWLTGVFA AAMAAAVLST YNSLLNSATA LYVCDIHEAY VNDNPNVVRL
SGWVTAMLTI LSLVLVPIYQ QADSIINLLQ QLNGLLSMPI LSIFVVGLVF KDVDARAGIA
AVIFGVLLYG SLTFDFSPVY TTLHYIHLMP ITLVSCISFA LFINRFVLGQ RAKLAWGSND
GLEAAK
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