Gene Patl_3681 details

Gene Information

• Locus tag: Patl_3681
• ID: 4175461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4439677
• End bp: 4440453
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638056711
• Product: SapC
• Protein accession: YP_663237
• Protein GI: 109899982

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATCA GCTACATCCC TCTTGATAAA GAGAAACATA AAGATCTAAA AATCAACCTT 
CAGCACGACT TCGGCTATGC AAAAGAAGCC CATATTGCTG CGGCATCAAT CCGTGAATAC 
GCTCAACTAG CTAGCGTAAT GCCGGTTGTT TTTGTAAAAG ATCCAAATTC TGAGAACTTC 
CATTCTGTGG CTATGTTGGG AACTGAAAAA GGCTCAAACC TTTTCGTTCA TGAAGGTAAA 
TGGCAAGTAC ATTGTCTGCC TATGAATATT CAACGTTACC CGTTTGACGT GCGTCCTGAT 
GGTGAGAAGT TAGGCGTATT CTTCGACGAA AACAGCGCAC TTATTACAGA CGACGGTGAG 
CCAGTTTTCA CCGCTGAAGG CGAGCCGAGC CCGTTTTTAG AAAACCGCCA GCAGTTGCTT 
TCTGAATTAG CAAACAGCGA AATGGCAACA CAACGTTTCA TTAAAAAATT GGTTGAGCTA 
GATTTACTCG ATCCAATCGA ATTATTAGTT AACTACGCTA ATGGCGAAAA GCGCAATATT 
ACTGGCATGT TCAGTGTGAG CGAAAAACGT CTGCAAGATC TTAGTGAAGA GCAAGTGGTT 
GAGCTACATA AAAGTGGTTT CCTAGGGGCA GCGTATGCAG TCCTTATGTC ACTTGGTCAG 
CTTAATCGTT TGGTTCACTT GTCGAACAAT ACGGACAAGG CGATTCAAAA CTTACAGTTG 
CGCGTAGGTG ATGCCATCAC TAAAGAGCAA GCGGCAGAGC AACCTGCAAA CGCTTAG 

 

Protein sequence

MTISYIPLDK EKHKDLKINL QHDFGYAKEA HIAAASIREY AQLASVMPVV FVKDPNSENF 
HSVAMLGTEK GSNLFVHEGK WQVHCLPMNI QRYPFDVRPD GEKLGVFFDE NSALITDDGE 
PVFTAEGEPS PFLENRQQLL SELANSEMAT QRFIKKLVEL DLLDPIELLV NYANGEKRNI 
TGMFSVSEKR LQDLSEEQVV ELHKSGFLGA AYAVLMSLGQ LNRLVHLSNN TDKAIQNLQL 
RVGDAITKEQ AAEQPANA