| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3674 |
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| Symbol | |
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| ID | 4175454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4430970 |
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| End bp | 4432727 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056704 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_663230 |
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| Protein GI | 109899975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTG CTTTCCCTAG GTTATTTAGC CGGCAGAATT TCATTTCAGG TCAGGACCGT
ACTTTTAATC TTATTTGGTT ACTGACCATT TCCTGTTCTT TGATCCTAGT CGGCTTGGGT
TTGCGAGATC CCTGGCCTGC GGATGAACCA CGCTTTGCGT TAATAGCCAA AGAGATGGTC
GACTCAGGTC AATGGTTTTT CCCCATGCGT GGCGGTGAGC TTTACCCAGA CAAACCACCG
ATATTCATGT GGTGTATCGC CCTATTTTAC GCGCTGTTAG GCTCGGTGAA ACTGGCTTTC
CTTTTACCCA GTGCGATCGC TGGGATAGTG ACGGTTTTAC TGACCTACGA TATTGGTCGC
AGGCTGTGGT CTGAGCAAAT TGGTTGGTAT GCAGGTTTGT TGTTGCTTGC TACATTGCAA
TTCACCCTAC AAGCGAAAAC AGCTCAAATT GATGCTTTGG TTTGCTGCTT TATTACCATG
GGGTGTTATG GTTTATTACG TTTTTTGCTG CTCAACGGTC GCTGGTCTTG GTATTTTCTA
GCGTGGTGCT TTATGGGCTT GGGGATTATT ACTAAGGGGG TAGGATTTCT ACCACTGCTC
ATGCTGATAC CATTTACCGC GCTTCGGTTT AGTCAGCAAA CATATAGGTC AAGCCCTGTA
AGGGGATTGA CATGGCATTG GCTGCTAGGG CCTGTGGTGA TGTTAGGGTG CATCGGGCTA
TGGGTCTTAC CCATGCTTTA TTGGGTAGAT GTTCAACAGA ACCCGCTTTT CGATGCCTAT
CGAGACAATA TTCTATTCAA GCAAACGGTT ACCCGCTACG CGGATTCTTG GCACCATTTA
AAGCCATTTT GGTATTACCT AACCAATGTT ATCCCAGTTT TTTGGTTACC TTTATGTCTC
TTTTTTCCAT GGCTTATCAC GCCTTGGGTG AGGGCGATAA AAGAGGGGGA CTGGCGGATT
ACTTTGATAC TGGGTTGGGT CGTGTTGTTA TTGATTTTTT TCAGTATAAG TCCAGGCAAA
CGTGGCGTGT ACATCTTGCC TGCCTTGCCT ATGCTCGCGT TAATCACTGC GCCATACTTA
CCCCAGATTA TGCGCAGTAA AATCGTAAAT GGTCTTGTTT ATTCGGTTGT TTTGTTATTG
TCACTGGCGC TATTAACCTT TGGTTTAGCA GGACTTTTTG ATACAACATT TACCAGCAAA
CTCAGCATTA AACACTCAAT TGAGCCTTGG GGTTTTTTGC TCACCATGGG CATAGTAGGC
GTACTGATAT GCGCTTTTCT GTTGATGGTA AGGAAGTATC GGGTGAGTCT ATCGTGCAGT
TGGTTGCTGT TTATACCTGT GCTATGGATG GGTTATTCTA CATGGGGATA TACGCTCTTG
AATGACGTTA AAACGCCCAA AAATGTTTTT GCGAAAATGG AGTTGTTGGC ACCTAAAAGT
AGACCTCTGG CGCTAGTGAA TTTCTCCGAG CAATTTATTC TTTTTTCACC CTATAATGTG
ACTCATTTTG GCTATCACAT GCCAACTGAA CTTCAAGTAC AGGCAGCGTG GCGCTGGCAA
AAATCTCACC CAAATGGACT CATTTTGCTT GATGCACAGA CACCCACTGA TTGTTTTGAT
ATGACGCAGG GGCACCCTGT AGGCTTGGCT CACCGAGTAA ATTGGCTGTT ACTTGATAGT
TCTGCTAGGC AAGCATCGTG CCCAGAGCCG AGCATTAGGG TCAATGTTTA CCATACAGCT
GCATTAGGCA CTCATTGA
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| Protein sequence | MISAFPRLFS RQNFISGQDR TFNLIWLLTI SCSLILVGLG LRDPWPADEP RFALIAKEMV
DSGQWFFPMR GGELYPDKPP IFMWCIALFY ALLGSVKLAF LLPSAIAGIV TVLLTYDIGR
RLWSEQIGWY AGLLLLATLQ FTLQAKTAQI DALVCCFITM GCYGLLRFLL LNGRWSWYFL
AWCFMGLGII TKGVGFLPLL MLIPFTALRF SQQTYRSSPV RGLTWHWLLG PVVMLGCIGL
WVLPMLYWVD VQQNPLFDAY RDNILFKQTV TRYADSWHHL KPFWYYLTNV IPVFWLPLCL
FFPWLITPWV RAIKEGDWRI TLILGWVVLL LIFFSISPGK RGVYILPALP MLALITAPYL
PQIMRSKIVN GLVYSVVLLL SLALLTFGLA GLFDTTFTSK LSIKHSIEPW GFLLTMGIVG
VLICAFLLMV RKYRVSLSCS WLLFIPVLWM GYSTWGYTLL NDVKTPKNVF AKMELLAPKS
RPLALVNFSE QFILFSPYNV THFGYHMPTE LQVQAAWRWQ KSHPNGLILL DAQTPTDCFD
MTQGHPVGLA HRVNWLLLDS SARQASCPEP SIRVNVYHTA ALGTH
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