Gene Patl_3667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3667 
Symbol 
ID4175447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4424009 
End bp4424458 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content45% 
IMG OID638056697 
Producthypothetical protein 
Protein accessionYP_663223 
Protein GI109899968 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000287842 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAGAT ATTTAAATAA ACCCATAGTC GGCACCCTTG AGTTGTGTGA CTTACCAGAA 
CTGACGATCC AGTCGTTAAA CGTTAGGGTT GATACAGGCG CTACGACCTC ATCTCTGCAC 
GTAGACAATA TTGAAGAGTT TGAACGTGGT GGCAATATTT GGGTCAGCTT CGACATTCAT 
CCGAATATCC ACAATGTGGC TGACATTGTT CGCCGCGAAG CAAAAGTAGA AGCCATCAAG 
CGAGTCAAAA GCTCAACCGC CACCCTTGAA AAACGCTATA CCATTAAAAC TGAAATCCAA 
ATGGCCGATT TAACATGGGA CATTCAATTG ACCCTCACAG ATCGCTCTGA AATGACCTAT 
TTGATGTTGC TCGGGCGCGA AGCAATGGCC GGAAAGTTCC TCGTTGACCC TTCACTTGAA 
TATGAACTTA GCGCGGGTTC AGTGAATTAA
 
Protein sequence
MHRYLNKPIV GTLELCDLPE LTIQSLNVRV DTGATTSSLH VDNIEEFERG GNIWVSFDIH 
PNIHNVADIV RREAKVEAIK RVKSSTATLE KRYTIKTEIQ MADLTWDIQL TLTDRSEMTY 
LMLLGREAMA GKFLVDPSLE YELSAGSVN