| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3660 |
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| Symbol | |
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| ID | 4175440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4414948 |
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| End bp | 4415685 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056690 |
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| Product | GntR-like |
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| Protein accession | YP_663216 |
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| Protein GI | 109899961 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.596872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGTC GTCGATTATT CTGGAATATA GTCGAAAAAA TAGAACAGCT TATTGAGTCC
GGTTTGTACC AGCCAGGAAG CCGCTTACCC CCAGAACGCG AGTTAGCAGA AACCTTCGAC
GTCAGCCGTC CTACCATCCG TGAAGCGATT ATTGCTTTGG AAGTAAGGGA ACGAGTTGAA
GTAAAAACAG GCTCTGGTGT TTACGTGTTG GCCAGCAAAC ATGCTCCAAA GCCGTTGAAT
AACATTAGTG CCTTTGAGCT CACTCAAGCC CGCGCTTTAG TTGAGGGCGA AGCTGCAGCA
CTTGCAGCTA CAACCATCAC TGATGATGAA TTACGTGATT TAAAAAGCAC ACTCGACGCA
ATGGAAAAAG AAGAAAATCC AGAACACGCT GATCGTGATT TTCATATGAT TATTTCTCGT
GCGACACGTA ATAATGCCAT ATTGCTTGCC GTTGAGAACT TGTGGCAAGT ACGTGATACC
AATGCCGAGG TCAAGGCTGC TTATAAAGGT GTTTGTAGCC AAAGTAGTTC AAAACGATTA
CACGAGCATA CGGTCATATA TCAAGCTCTT AAGAAGCGTG ATAACCAAGC CGCTCGCGCT
GCTATGCACC AGCATTTTAA TCGATTGATA AACGCATTAT TCGAAGCTAA AGAAGCGCAA
GCGTTAGAAG AGGTTCGTCG TCAAACGATT GAGACCAGAG GCTTATACTC ACTGTCGCAC
GTCATTAAAC AAGCATAG
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| Protein sequence | MKSRRLFWNI VEKIEQLIES GLYQPGSRLP PERELAETFD VSRPTIREAI IALEVRERVE
VKTGSGVYVL ASKHAPKPLN NISAFELTQA RALVEGEAAA LAATTITDDE LRDLKSTLDA
MEKEENPEHA DRDFHMIISR ATRNNAILLA VENLWQVRDT NAEVKAAYKG VCSQSSSKRL
HEHTVIYQAL KKRDNQAARA AMHQHFNRLI NALFEAKEAQ ALEEVRRQTI ETRGLYSLSH
VIKQA
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