| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3658 |
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| Symbol | |
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| ID | 4175438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4410804 |
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| End bp | 4412102 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056688 |
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| Product | major facilitator transporter |
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| Protein accession | YP_663214 |
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| Protein GI | 109899959 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA AAAATTTGCG TTGGTGGGTA GTGTCTCTGG TTGCCTTAGC AACCGTGATT
AACTACATAG ATCGTTCTGC ATTAAGCGTA CTTTGGCCAG ATATCGTGCA AGATCTCTTT
CCAGATAAAT CAGATTTAGA ACGTAAACAG ATATACGCAA ATATTTCGAT TGTATTCATT
TTATCTTATG CCTTTGGCCA AGCGATATTC GGTAAAATAT TTGATTGGGT AGGTACTCGA
TTAGGCTTCG TTTTGTCTAT TGGCGTGTGG TCTTTGGCAA CTGCTGCTCA TGCCTTCGCT
CAGGGCGTAC TAAGTTTCAG TATTTTTCGC GCCATTCTTG GGGTTGCAGA AGCAGGTAAC
TGGCCAGGCG CCGCTAAAAG TAATGCTGAT TGGTTCCCCA GTAAAGAACG TGCGCTTGCC
CAAGGTATTT TTAATTCAGG CGCCGCTATA GGCGGCATCA TAGCTATCCC TCTTATTGCC
TATCTGACCG TGTTCTTCAA TTGGCAGATG GTCTTTGTGG TGATCGGTTT GGTGGGCTTA
CTGTGGCTTG TTCCTTGGAT TATTCTGGTA AAGGCTCCGC CCAAATCACA TCCATGGATC
ACGGAAGAAG AGCGTGCCTA CATTTTAAGC GGTCAGCGCA CAGTAGAGTC AGATACCACT
AGTGAAGAAG ACGAGTACAA CCCAACTACA AAGGAGTTGC TGTCGCGCAA ACAAAGCTGG
GGCGTGATTA TTGCCTCTGC TGCGATTGAT CCCATCTGGT GGTTATTTGT TTTTTGGATC
CCTATTTACT TGAACGAAGT GTACCAAATG GATGTAAAAG CGATTGGTAT TTACGGTTGG
GTACCTTATG TAGGGGCTAT GATTGGCGCG TGGTTTGGTG GTTTGTTGGC GCAAAATCGC
ATCAAAGCGG GTTGGAATGT GGACAAAACC CGCAAGCTCA CCATTACATT AGGTTGCCTG
ATCATGTTGC CCGCTTTATT AGCTATGGCT GACCCAGGCG GCCCAACGAC TGCGGTTATT
ATCATGGCTG TTATTTTGTT TGGCTTCCAA ACTGCAATAG GTAACGTGCA AACACTACCC
AGTGACCTTT ATGGTAAAAA AGCGGTGGGT ACCTTATCTG GCTTTTCAGG TATGGCAGCA
AAATTAGGTG CTTTGGGGTT AACTGCATTA GTGCCGATTT TAACGGCAGA CGGCAACTAT
ACCCCGGCCT TCGTTATCGG AGCTTCACTG GCTGTAATTG CGATGCTGGC GATTTGGGTA
TTAATCCCGA AAGTAGAGCC ATTAAAAAGT CAAAAATAA
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| Protein sequence | MKMKNLRWWV VSLVALATVI NYIDRSALSV LWPDIVQDLF PDKSDLERKQ IYANISIVFI
LSYAFGQAIF GKIFDWVGTR LGFVLSIGVW SLATAAHAFA QGVLSFSIFR AILGVAEAGN
WPGAAKSNAD WFPSKERALA QGIFNSGAAI GGIIAIPLIA YLTVFFNWQM VFVVIGLVGL
LWLVPWIILV KAPPKSHPWI TEEERAYILS GQRTVESDTT SEEDEYNPTT KELLSRKQSW
GVIIASAAID PIWWLFVFWI PIYLNEVYQM DVKAIGIYGW VPYVGAMIGA WFGGLLAQNR
IKAGWNVDKT RKLTITLGCL IMLPALLAMA DPGGPTTAVI IMAVILFGFQ TAIGNVQTLP
SDLYGKKAVG TLSGFSGMAA KLGALGLTAL VPILTADGNY TPAFVIGASL AVIAMLAIWV
LIPKVEPLKS QK
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