Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3657 |
Symbol | |
ID | 4175437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4409816 |
End bp | 4410739 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056687 |
Product | PfkB |
Protein accession | YP_663213 |
Protein GI | 109899958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAG TTGTGTTGAT AGGCGAGTGC ATGTTGGAAC TGCGCGAAGG TAAAGATGGT GTTATGCATC AGTCATTTGC AGGGGATGCA TATAATACTG CGGTTTATCA GAAGCGTGGT TTCGCGGAGC AAAATGTATG CTTCATGAGC GCAATTGGCC AAGATGTGGT CAGTGATAAA TTACTCCAGC ACTGTGAGAA GGCATCGCTG AACACCCAGT ACTTGTCACG CAAAAGTGAA CAAAACCCTG GGGTGTACAT GGTGCAAACC GACGAACATG GCGAGCGTTC GTTCCTCTAT TGGCGAGAGA ACTCAGCCGC TCGCCAACTT ATGCGCTTCG TCGACAGTGA AATGGTCAAT TCTATGCTGG ACAGTGATTT GGTTTTTTTC TCAGGCATTT CATTGGCTGT GATACACCCA GATGACCGTC CTGCATTTTG GGCAATGCTT AAAAAATTAA AAGAGAACGG GGTCAAATTG GCTTTTGATC CTAACTACCG CCCAAGACTG TGGGCCTCAC CAGAAGAAGC GCAACAGCAA TTTCATTACG CTTATCAGCT GACAGATATT CTTTTACCCG GAATTGATGA CTTCGCTCAG TTGTATGACC TAACGCAACT CAGTGAAATT CTAGAGTTTT GCCAGCCTTA TGACATTCAC GAATTAGTCA TAAAAAATGG TGCTAATAGC GTTTACTGTC AGTTGGGCAG CAATCTTATC CACCTCCCCA TCGCACCTGT AGAGCATGTT GTCGACACCA CCTCAGCGGG GGACTCGTTT AACGGTGTTT ATCTTGGAGC CAGATTAGCA GGTAAAGAGA TAGAGCATGC TGTGAGCCTA GCATCTAAGG CTGCTGCAAT CGTTATTCAG TATCCCGGCG CCATCACGCC TGAGTCAGAA TTTATTGAGC GTCTTAATCA ATAA
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Protein sequence | MQKVVLIGEC MLELREGKDG VMHQSFAGDA YNTAVYQKRG FAEQNVCFMS AIGQDVVSDK LLQHCEKASL NTQYLSRKSE QNPGVYMVQT DEHGERSFLY WRENSAARQL MRFVDSEMVN SMLDSDLVFF SGISLAVIHP DDRPAFWAML KKLKENGVKL AFDPNYRPRL WASPEEAQQQ FHYAYQLTDI LLPGIDDFAQ LYDLTQLSEI LEFCQPYDIH ELVIKNGANS VYCQLGSNLI HLPIAPVEHV VDTTSAGDSF NGVYLGARLA GKEIEHAVSL ASKAAAIVIQ YPGAITPESE FIERLNQ
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