| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3647 |
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| Symbol | |
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| ID | 4175427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4394633 |
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| End bp | 4395889 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056677 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_663203 |
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| Protein GI | 109899948 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.438351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACGAA CTAATATGAG CAACATGAAG ACGTTTTTTA AATCGCTACT GCCCGGCATA
TTTTTGTTTG GTTTCACAGT GGGCACGGGC AGCGTTACTG CCATGGCAAA AGCAGGTGCT
GATTATGGCA TGTCACTTTT ATGGACCATC TTTATCTCCT GCGCGATCAC TTACTTCCTT
ATTCAACTGT TTGGCAAGTT TACCCTCGTC ACCGGTTTAA CCGCATTGCA GTCCTTCAAA
AGACATATAC ATCCAGCGGT CAGTATTTTC TTTATTGTGG CCCTTACCAC TCAAATTTGC
GGAAGCGTAA TAGGCGTAAT GGGTATTCTT GCTGACGTGT GTTACGAATG GTCAAAGAAC
TTCGTTGAAG GGGGGATTTC CCAGCTGTAC TTTGCACTGT TTTTTATCGC CTTTGTGTAT
GTGATTTTTC TAATTGGTAA AACGGAAGTA TTCGAAAAGG TACTGGCTCT GTTCGTAGGC
ATCATGGCGT TATGCTTTTT AATTAACTTC GCTATCCTAA TGCCCCCCGC AATCGAAATA
CTCCAAGGGA TGGTACCAAA CGTACCGGAT ACTGCGCCCG GCAAAAGCTC ATTTCTGGTT
ATAGCATCTA TGGTGGGTAC TACGGTTTTC TCAGGGCTGT TCATTCTGCG TACCATACTG
GTAAAAGAGG CGGGTTGGAC TTTGGCAGAT CTGAAAACTC AAAATCGCGA TGCGCTGTTC
TCAGCTTTTT TAATGTTTAT TGTAAGCACA TCAATAATGG CAGCGGCAGC GGGCTCTTTG
TATGTACAAG GGATTACCTT GGTTCATGTT ACCCAAATGA TAAATCTACT AGAGCCTTTG
GCGGGCTCTG CAGCGGTGGC TATTTTCACT ATCGGGCTGA TTGCCGCTGG CGTATCGTCG
CAGTTTCCTA ATGTGGCTTT ACTGCCTTGG TTGTTAGATG ATTTTCATGA GCGTAAGCCA
GACTTAAAAA GACCAAGCTA TCGCATTATG GCGCTTGTGA TCTCTTGCTT GGGATTAATT
GTGCCGATTT TTAATGCTAA GCCCATTGCG GTAATGGTCA GCTCTCAAGC ATTTGGCGCC
TTAGTGTTAC CGGCGACAGT GGGCTGTATT TTTTACATCG GCAATAAGAA AGCGTTAATG
GGCAAACATC AGTTTTCCAC TATAACCAAT GTTTTCTTAT CGCTGATCTT TGTCTTTGCG
TTGGTCATGA GTTACATGAG CTACAACGGC ATTCTTTCTA CCCTGCAAGC GATGTAA
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| Protein sequence | MVRTNMSNMK TFFKSLLPGI FLFGFTVGTG SVTAMAKAGA DYGMSLLWTI FISCAITYFL
IQLFGKFTLV TGLTALQSFK RHIHPAVSIF FIVALTTQIC GSVIGVMGIL ADVCYEWSKN
FVEGGISQLY FALFFIAFVY VIFLIGKTEV FEKVLALFVG IMALCFLINF AILMPPAIEI
LQGMVPNVPD TAPGKSSFLV IASMVGTTVF SGLFILRTIL VKEAGWTLAD LKTQNRDALF
SAFLMFIVST SIMAAAAGSL YVQGITLVHV TQMINLLEPL AGSAAVAIFT IGLIAAGVSS
QFPNVALLPW LLDDFHERKP DLKRPSYRIM ALVISCLGLI VPIFNAKPIA VMVSSQAFGA
LVLPATVGCI FYIGNKKALM GKHQFSTITN VFLSLIFVFA LVMSYMSYNG ILSTLQAM
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