| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3642 |
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| Symbol | |
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| ID | 4175422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4389803 |
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| End bp | 4390237 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056672 |
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| Product | RbsD or FucU transport |
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| Protein accession | YP_663198 |
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| Protein GI | 109899943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0675148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAAAA CAGCAGTAAT ACATCCTACT ATTTTAGAGG CGCTTGGGCG CTCGGGTCAC
TTCGCGCAAG TTGTTATCGC TGATGGTAAT TTGCCTGTGG CTGCCATGAC CGGACCAAAC
TCAACCTTAG TGCACTTAAA CTTTCGCCCA GGAATGTTAG ATGCATTAAG CGTACTGGAG
GGCATTCTTG AAGTATGCCC GATTCAAGGG GCTATCGTGA TGGAAAAGCC TCCTGAGGCA
AATGCCGAAA TTCACACAGC ATACCAAGCT CTATTAGGTG ATGTGACTTG GGAAGCCATG
GAGCGCTGGG CGTTCTACGA CAAAATCCGT GCCCCAGCCA CCACCTTGAT TATTCAAACC
GGTGAACAAC GCCGATTTGC CAACCTGATA TTGACGGTCG GTGTCGTAAA AATGGCAGAA
GAGAGTCGTT TTTAA
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| Protein sequence | MLKTAVIHPT ILEALGRSGH FAQVVIADGN LPVAAMTGPN STLVHLNFRP GMLDALSVLE
GILEVCPIQG AIVMEKPPEA NAEIHTAYQA LLGDVTWEAM ERWAFYDKIR APATTLIIQT
GEQRRFANLI LTVGVVKMAE ESRF
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