| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3634 |
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| Symbol | rbgA |
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| ID | 4175414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4376168 |
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| End bp | 4377172 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056664 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_663190 |
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| Protein GI | 109899935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.909228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTC ATTGGTATCC TGGGCACATG CACAAAGCCC AGAAGGAAAT AAAAGAATTA
TTGCCGCAAG TAGATTTACT GATAGAAGTG CTTGATGCGC GAATTCCTTA TTCCAGTGAA
AATCCAGCCA TTGCCGCTAT TCGTGGTGAC ACGCCTTGCA TCAAGGTGTT GAGTAAATCT
GATTTAGCTG ACCCTGATGT AACCGCAATG TGGCAAGCGC ATCTTGAACA AGAGCGCGGA
GTGAAAACAT TCACTACCAC CACAGAACAA CCGCAAAAAA TGAAGCAGAT CATCGATTTG
TGCCGCAAAA TGTTGCCTGA AAAAGACGCC AGCATTAAGA CCATTAATAC CATGATTTGC
GGTATTCCTA ATGTGGGCAA GTCTACCCTT ATCAATATAT TGGCAGAGCG CATCATAGCC
AAAACAGGGA ATGAACCGGC GGTGACAAAA GCTCAACAAA GGATCAACCT AGGCAGTGGG
ATTATTCTTT TTGATACGCC AGGTATTTTA TGGCCTAAGG TGGAAAACCC GCAAAGTAGT
TATCGTTTAG CCACAACCGG TGCAATTAAA GATACCGCGA TGGAATATGA CGACGTGGGC
TTTTTTGCAG CAGATTACTT AATCAAAGCT TACCCAGATT TACTTAAAGA GCGCTACAAG
CTTGAAAATA TTCCTGATAC GGAAATAGAA TTTCTAGAAA TGGCCGCAGC TCAGCGCGGC
GCATTGCGCG CAGGCGGGCG AGTGAATTTG CATAAAATAT GCGAAGTCTT GGTTAACGAA
TTTCGCTCAG GCAAGTTAGG TCGCATTAGT CTTGAAACCC CTGACATGAT TGTGAAGGAA
GAGGCTGAAA TGGCCGCTGC TGAAGCAAAG AAAGCAGAAG AAAAAGCGCT GCGTAAAGAG
CGCTTTAAAA CTGGCTCGCT GACGCGTGAT AAAAAAGCCC AGAAAGAGCA CCGTATTGAG
CGCGTACAAC GGCGCAGCAA AGAGAAGCAA GCGCGCAAAA AATAA
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| Protein sequence | MSIHWYPGHM HKAQKEIKEL LPQVDLLIEV LDARIPYSSE NPAIAAIRGD TPCIKVLSKS
DLADPDVTAM WQAHLEQERG VKTFTTTTEQ PQKMKQIIDL CRKMLPEKDA SIKTINTMIC
GIPNVGKSTL INILAERIIA KTGNEPAVTK AQQRINLGSG IILFDTPGIL WPKVENPQSS
YRLATTGAIK DTAMEYDDVG FFAADYLIKA YPDLLKERYK LENIPDTEIE FLEMAAAQRG
ALRAGGRVNL HKICEVLVNE FRSGKLGRIS LETPDMIVKE EAEMAAAEAK KAEEKALRKE
RFKTGSLTRD KKAQKEHRIE RVQRRSKEKQ ARKK
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