| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3622 |
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| Symbol | |
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| ID | 4175402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4359823 |
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| End bp | 4360776 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056652 |
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| Product | transaldolase B |
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| Protein accession | YP_663178 |
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| Protein GI | 109899923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.517107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCAATC AATTACAAGC ACTACGCGAT ATCACCACTG TTGTTGCCGA TACTGGCGAC
ATAGAAGCGA TCAAAAAGTA TCAACCCGTT GATGCGACGA CCAACCCTTC ATTGTTGCTT
AAAGCGGCTG AGATGGAGCA ATATCGCTCG CATCTTGAAA ATGCGGTTGC TTGGGCAAAA
GAGCAATCTG ATGACGCTGA CCAGCAGATC ATTGATGCTG GTGACAAGCT AGCGGTGACC
ATAGGGACTG ATATTGTGAA TATCGTTCCT GGTCGTATTT CTACAGAAGT AGATGCCCGT
TTGTCGTTTG ACACGCAAGC CAGCATCGAA AAAGCGCACA AGCTTATCGC TTTGTATAAA
GAAGCAGGCA TAGATAAAAG CCGCATCTTA ATTAAATTAG CGTCAACATG GGAAGGTATT
AAAGCCGCAG AACACCTTGA AAAAGAAGGT ATCAATTGTA ACTTAACCTT GTTGTTTAGT
TTCGCTCAAG CCCAAGCCTG TGCTGAAGCC GGTGCTTACC TAATTTCACC CTTCGTTGGC
CGTATACTTG ATTGGTATAA AGCCAAAACC GGTAAAACTG AATATGCAGC CAGTGAAGAT
CCTGGTGTGC AATCAGTGAC TAAGATCTAC AATTACTACA AAGAGCACGG CTATAAAACC
GTCGTTATGG GCGCAAGCTT CCGTAATATC GGTGAAATTA CCGAACTTGC TGGCTGTGAC
CGCTTGACCA TCAGCCCGGG TTTGTTGGAA GAGTTATCTA ACAGCGATGC CCCGCTTGAA
GTGAAGCTGA AAGACACGGG AGCAACAACG ACTCCTGGTA AGCCACTTGA TGAAGCTGCA
TTCCGCTGGG AAATGAACCA AGATGCCATG GCAACTGAGA AGTTGTCTGA AGGTATTCGT
AACTTTGCGG CAGACCAAGT GAAACTTGAA ACGCTACTTA AAAGCTACGT GTAA
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| Protein sequence | MSNQLQALRD ITTVVADTGD IEAIKKYQPV DATTNPSLLL KAAEMEQYRS HLENAVAWAK
EQSDDADQQI IDAGDKLAVT IGTDIVNIVP GRISTEVDAR LSFDTQASIE KAHKLIALYK
EAGIDKSRIL IKLASTWEGI KAAEHLEKEG INCNLTLLFS FAQAQACAEA GAYLISPFVG
RILDWYKAKT GKTEYAASED PGVQSVTKIY NYYKEHGYKT VVMGASFRNI GEITELAGCD
RLTISPGLLE ELSNSDAPLE VKLKDTGATT TPGKPLDEAA FRWEMNQDAM ATEKLSEGIR
NFAADQVKLE TLLKSYV
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