| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3614 |
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| Symbol | |
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| ID | 4175394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4353504 |
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| End bp | 4354013 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056644 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_663170 |
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| Protein GI | 109899915 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.825013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG AAAACCAAAC AACCCCAGCT GACGCAGCAC AAGCCGCTCA GGGACCTCAA
TTCGCAATTC AACGCATTTA CACTAAGGAC ATTTCTTTTG AAACGCCTAA TTCACCGGCG
ATTTTTCAAA AAGAATGGAA ACCTGAAGTT CAACTAGATT TGGACACCCG TAGTGCGCTG
ATCGAAGAAA ATGTCTACGA GATCGTTTTG GCTGTCACTG TAACGGCTAT GTTAGGTGAA
GAAACAGCCT TTTTGTGTGA AGTACAGCAG GCGGGTATCT TCGCGATTGG CGAAATGCCT
GAGCAAAATA AAGCGCACAT GTTGGGCTCT TTCTGCCCGA ACACGCTTTT CCCTTATGCA
CGCGAAACGA TTTCTAATTT AGTCAATCGT GGTACTTTCC CTCCTCTTAA CCTTGCGCCG
GTAAACTTTG ACGCTATTTT TGCAGCATAC ATGCAAAAAC GTGCGGCTCA GCAGGCACAA
GAACAAGCAC CTACGCAGCT AGACGCGTAA
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| Protein sequence | MAEENQTTPA DAAQAAQGPQ FAIQRIYTKD ISFETPNSPA IFQKEWKPEV QLDLDTRSAL
IEENVYEIVL AVTVTAMLGE ETAFLCEVQQ AGIFAIGEMP EQNKAHMLGS FCPNTLFPYA
RETISNLVNR GTFPPLNLAP VNFDAIFAAY MQKRAAQQAQ EQAPTQLDA
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