| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3610 |
|---|
| Symbol | |
|---|
| ID | 4175390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4349820 |
|---|
| End bp | 4350911 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638056640 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_663166 |
|---|
| Protein GI | 109899911 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGTTT GCTTGTCACC CATTTATGCC AATGGCCAGT CCAAAGATGA ACTACAAGCA
CTACAAAAAC AGATAAAGCA AAAGCAGCAA CACGTTGCCC AGCAGTTAGC AAAAGCGAAA
AGTTTACAAT CTGATTTAAA GCAAATTGAA CTGAAGATCG CCAAAGCGGC GACGGCACTC
AATGCCACTG AGCAAGAGCT TAAGGACAAT CAGCAAGAGC AAAAAAAGCT TAAAAAACGC
CAAAGTGATA TTCAGCAAAA ATTAGCCCAG CAACAAGATG TGTTAGCTAG GCAAATTCGT
AGCGCGTTTA TGACAGGCAA CCATGATTAC GCCAAGATGC TACTCAACCA AGAAAACCCA
GGCAAGTTCG AGCGCACCAT CACCTATTAT CAATACCTGA ATGAGGCGCG TCGTGAATTA
ATTGACGAGT TTTTGCTACT GGGTAAAGAG CTGACACAGG TCAATCTAAC CTTGATTGAA
AAGCAAGACA GCCTACAAAA TCTGCTCGAT CGCCAACAAG CGCAACAAGC CACGCTAAAT
CAAGGGCAAA AGAGCCGTAA GCAGACGTTA AGCAAATTAC AGTCTGCCAT TGAAAGCGAT
GCGGCCAAAA TTGAAGAACT GCAAGCAAAT GAGCAGAATC TACGAAAAGC CATCGCTGAA
GCGGAGCGCT TGGCAGCCCA AAAACCGACC AGCTTCGACG GTTTAGCCAA ACTAAAAGGC
AAATTGTTGA AACCAGCAGA TGGCCGAGTG CGCAAATTAT TTGGTACAAA ACGTGAGGGG
CAGATACGCT GGAAAGGCAT TATTGTTGAG GGAAATGCAG GCAGTAATGT TATCGCGATC
CACCATGGTA AAGTTCTGTA CGCTGATTGG TTGCGGGGCT TTGGTTTGGT CACTGTGCTC
GATCACGGTA ATGGCTACAT GAGCTTGTAT GGCCACAATC AAGCTTTACT GCATCAGGCC
GGTGATACCG TGGCCGCTGG TGAGCCCATT GCGCTTGTTG GTCAAAGTGG CGGGCAAACC
TCCCCTAATT TATATTTTGA AATTCGCTAC AAGGGCGACC CTGTTAACCC CACGCAATGG
ATTAAGCTTT AA
|
|---|
| Protein sequence | MFVCLSPIYA NGQSKDELQA LQKQIKQKQQ HVAQQLAKAK SLQSDLKQIE LKIAKAATAL
NATEQELKDN QQEQKKLKKR QSDIQQKLAQ QQDVLARQIR SAFMTGNHDY AKMLLNQENP
GKFERTITYY QYLNEARREL IDEFLLLGKE LTQVNLTLIE KQDSLQNLLD RQQAQQATLN
QGQKSRKQTL SKLQSAIESD AAKIEELQAN EQNLRKAIAE AERLAAQKPT SFDGLAKLKG
KLLKPADGRV RKLFGTKREG QIRWKGIIVE GNAGSNVIAI HHGKVLYADW LRGFGLVTVL
DHGNGYMSLY GHNQALLHQA GDTVAAGEPI ALVGQSGGQT SPNLYFEIRY KGDPVNPTQW
IKL
|
|---|
| |