| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3609 |
|---|
| Symbol | |
|---|
| ID | 4175389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4349036 |
|---|
| End bp | 4349803 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638056639 |
|---|
| Product | protein of unknown function DUF610, YibQ |
|---|
| Protein accession | YP_663165 |
|---|
| Protein GI | 109899910 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.73466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACT TTTCATTCCG CCTCTGGTGC ATATCGCTCT TGCTGACTTT GCTCCCGACT
TCGGCGGCGC TAAGCGCGCA GATCGCTATT ATCATTGATG ACGTTGGTAA CAACAGTCAT
CGAGATGCAG CAGCCTTGGG GTTACCCATT AACGTTGCTA TTTCGATTTT GCCTCACAAG
CATCTAAGCC AAAAATACGC CCTGATGGCG CACGAGCAGC ACCGAGAATT CCTACTGCAC
ATGCCGATGG AGTCGATGGC GGGTATCAAG CAAGAGTCAA ACGTGTTGTT GGCCAGTATG
AGCGATAAGC GGATTGTGCA AACCTTAAAT GATGCGTTTG CCAGTGTGCC CAATGCACTG
GGATTGAATA ATCATATGGG GAGTCGTTTA ACACAGTTAG AAACCCCGAT GCGCACCACC
ATGAGCTACT TACATCGTCA CGGGCTCATT TTTGTCGACA GTCGCACAAC GGCATTGACC
CGAGCAGAAG CTATTGCCAA GCAAACGAAG GTGCCAGCAC TGCGGCGACA TGTATTCTTG
GATAACGACT TATCCGAAGC AAAAATAGAG CGCCAGTTTA ATATATTGGT CAAAAGAGCG
CGTAAATACG GGCGCTCTCT GGCGATTGGT CACCCTCATA TGCAGACGAT TGCCTACCTG
AAAAAAAGGC TACCAACGTT AGCCCAAGAC GATGTACAGT TAATTCCCCT CAGTGCTATG
TTGACGCCCC AAGTGGATAA CGCTAAACCG CTGCATATAG GTGATTAG
|
|---|
| Protein sequence | MLNFSFRLWC ISLLLTLLPT SAALSAQIAI IIDDVGNNSH RDAAALGLPI NVAISILPHK
HLSQKYALMA HEQHREFLLH MPMESMAGIK QESNVLLASM SDKRIVQTLN DAFASVPNAL
GLNNHMGSRL TQLETPMRTT MSYLHRHGLI FVDSRTTALT RAEAIAKQTK VPALRRHVFL
DNDLSEAKIE RQFNILVKRA RKYGRSLAIG HPHMQTIAYL KKRLPTLAQD DVQLIPLSAM
LTPQVDNAKP LHIGD
|
|---|
| |