| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3607 |
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| Symbol | |
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| ID | 4175387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4347602 |
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| End bp | 4347832 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056637 |
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| Product | ChaB |
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| Protein accession | YP_663163 |
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| Protein GI | 109899908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4572] Putative cation transport regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0044472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATACG ATTCGCATAA AGACCTCCCC GAAAGTGTAC AAAATGTATT GCCCCCTCAT
GCCCAAGATA TTTATCTCGC TGCTTTTAAT AATGCCTGGA ACGAGTACAA AGACCCAGAT
GATAGACATG GCAAGCAAGG TCGTGAAGAA GTCTCCCATA AGGTGGCTTG GTCAGCTGTG
AAGCAGTCTT TTCACAAAAA TGATGATGGC ATGTGGGTCA AAAGCAGCTA G
|
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| Protein sequence | MPYDSHKDLP ESVQNVLPPH AQDIYLAAFN NAWNEYKDPD DRHGKQGREE VSHKVAWSAV
KQSFHKNDDG MWVKSS
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