Gene Patl_3600 details

Gene Information

• Locus tag: Patl_3600
• ID: 4175380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4336676
• End bp: 4337155
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638056630
• Product: excinuclease ABC subunit C
• Protein accession: YP_663156
• Protein GI: 109899901
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2827] Predicted endonuclease containing a URI domain

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGACTTT ACGTTAACTT ACATTGTCCT GCGTCTTGGA CTTTGGGATT TGGGATTTGG 
GATTTGGGAT TTGGGATTTG GGCGACACGA TTTGTTTTTT TGTTTTATGG TTGGCGTTTA 
TATGTGAAAC TTTACCGTTT TCATATTCAG GATGTCATAC GCAACGTGCA ACCTTGGTTT 
CTGTACATCA TTGAAAACAA ATATCAGCAT TATTACACTG GCATTTGTAA GGACTTGAGC 
AAGCGTTTTG CTCAGCATAA TAGTAGCGGC CGGCTGTGCG CAAAAGCCTT GCGAGGTAAA 
GGCCCATTGA AGATGATTTA CGCCGTTGAG TTAGTTGATC ACTCTGATGC ATTAAAAATG 
GAACTGTGGG TAAAAAAACT CACGAAAGCG AAAAAAGTAC AGTTAGTCAG TGGTAAGCTG 
GTTAGCCCGT TTACGACTGA CGCTGCGCCA CTCGCGACCG TTGATAAGAC TGAATGTTAG 

 

Protein sequence

MRLYVNLHCP ASWTLGFGIW DLGFGIWATR FVFLFYGWRL YVKLYRFHIQ DVIRNVQPWF 
LYIIENKYQH YYTGICKDLS KRFAQHNSSG RLCAKALRGK GPLKMIYAVE LVDHSDALKM 
ELWVKKLTKA KKVQLVSGKL VSPFTTDAAP LATVDKTEC