| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3597 |
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| Symbol | |
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| ID | 4175377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4330795 |
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| End bp | 4334001 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056627 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_663153 |
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| Protein GI | 109899898 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.335598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGC ATCAATTGCC TTCATCATCG GGTAATAACA ATCCGTTGCA CGGCATTATC
GCTTGGTTTG CTAATAACTC AGTGGCGGCT AACTTGTTAC TGGTCAGTGT GATTGTGATG
GGGGTTATGT CTCTTTCAAC TTTACGCAAA GAGGCTTTTC CCAGTCTTGA ACCAGACAAA
ATATCAGTCT CTGTGAAGTA CGACAGCGGT GATGCATTGC AGGCCGAAGA AGGCATAGCG
CTAAAAATAG AAGAGGCGCT GGAAACCGTG CCTGGCATCA AGCGCATTAC CTCAACCTCA
GACGCCACCG GGAGCCACGT GAGTATCGAG AAGAAAACTG ATTATTCGCT CGATGAATTA
CTCACAGACG TTAAAAACCA AGTGGATGCC ATCAATAACT TCCCTGCAGA TGCAGAGCAG
CCGGTCATCG ATAAATCCAG ACGCCAAGAT CACGCCTTAA CGATACAGTT ATATGGCGAT
ACAGACCGTC ATACTTTACA AACCCTAGGG GAATTACTTA AAGCGGATTT ACTCGCTCAG
TCCGGCATCA GCGATGTTGA ACAAAAGGGT GTGCTAGACC CCATGATGTC AGTGGAGATA
GACGAAGGGA AATTGCAGGC GTATGGCCTA ACCATCAGCG ACATTAGTGA TGTGATTAAT
CAAGAATCTT CAAGCCCGTT GTCAACGAGC TTGCGTGACA GTAGCAAAAT TATTCGCTTG
AAAGCCGCTA ATCAGGCTTA TTGGCAAAGC GACTTTGCCA ATATTGTATT GTTAACCACA
CCAAGCGGTG CGCAAATAAA AATGGGTGAT GTCGCTAAGG TGACTGATAC CTTTGCTGAA
GACGCAAACT CACTAGGGCG ATACAACCAA CAAAACGCTG TGGCCATTGA AATATTAATG
GACGACAACA GCGATATTAC CGCCATTGTT GAGCAAGCGC ACAGCGTGAT CGACAATTGG
CAAGAGCGCG GGTTATTGCC ACAAAACGTT GAACTCACTA GTTGGTACGA CAAAAGCACC
ATGATCACCG AGCGCCTGTC GTTGCTGACC AAAAATGCGG TTACAGGCAT CATGATGGTA
TTCGTTATTT TGGCCATATT TTTGAACGTA CGAGTGGCAC TTTGGGTGGC GGGTGGCTTA
CCGTTTGTAT TTTTCGGCAC TTTGTATTTT ATGACTGACA CCTACGCTGG GCTGACCATT
AATGAAATGA CCACCTTTGG CTTCATTATG GCACTAGGCA TAGTGGTCGA CGATGCTGTT
GTGGTTGGTG AGAGTGTGTA CAGCACGCGC AGGCAACATG GCGACAGTCT CAACAACACC
ATTTTAGGCA CAATGAAAGT AGCCGTACCG ACCATATTTG GTGTGCTCAC CACTGTAGCT
GCCTTCATGA CGTTATCGAA TGTATCAGGG CCGTTAGGGC AAATTTACGC TCAGTTTGCC
ACCGTGGTGA CGATCTGTTT GCTGCTTTCA GTGGTCGAGT CAAAACTCAT CTTGCCTTCG
CACTTAGCGC ACATTGATAC CCAGCGCCAA GTAAAAGCGG GCCTCAGTGG TTTGTGGTCT
AAAGTGCAAC ATGGTGCTGA CTACGGTTTA AATTGGTTTA GTGACAATAT TTATCGCAAG
GTCATCGAGT ATTCATTGCG TTTTCGCTAT GCCGTGGTGG CAGGGTTTAT GGCCTTTTTG
ATTTTGGTGA TTGGCATGCC CATGACAGGG GCTGTTAAGG TCGGCTTCTT TCCAAGTATT
CCTGGGGATA CAGTCAGCGC CGATTTAGTC ATGCAAAATG ATGCAGCGTT TGGTCAAACC
AACACTAGTT TGTTTATGCT TGAACAAACG GCGCTACAAG CCGAGAAAAA CCTGATGGCT
AAACTTGATA GCCAAGAAAG CGAAATCACG AGTTTGCAGG TCGTTAGCAG CGGTGATACC
AGTGGTAGTG TAACGGTTGA ATTGATCAGT GGCGGCGCGT TTAGCGCCAG TGAGTTCGCC
AAAGAGTGGC AGCGTTTATC TGGCACTCCG GAGGGCAGCA AAAAACTGCA AATTCTAGCC
ACCCGTAAGA TGGTTGATAA CTTTAAGGTT GAGCTCAAAG CGTGGGATGA CGAGACCGTT
ATGGCGGCAG GTGCATTATT CAAAGAGCGT CTTGAAAACA CCCCAGGGGT GAATGGCATT
GACGACAATT TCAATCCCGG TCAGCCACAG TTAAAGTTCA CTCTGAATGC GCAAGGCCGA
GCACTAGGCA TGGACACCGC CAGCTTGTCT CAGCAGGTAT TGCAAGCCTT CGGTGGTGCG
ATAGTACAGC GTTACCAACG TGATAAAGAT GAAGTGAAGG TGAGGGTGCG TTACCCAGAG
AATGCTCGTC AAACTCCAGC CGACATCATG CAGTCGCGCA TTCGTTTACC GGATGGCACT
GTTGTGCCCT TAGTGAATGT CGCCACCATA AGCAGTGAAT ATCAGCAGGA CGAAATTACC
CGCATCGACG GTTTACGGGC TATTTATTTA AGCGCCCAGG TGGACAAGAA TGTCATCGCA
TCGAATGTGT TAGTGGATAA CTTACGCCGT GATTTAGTAC CGGAATTAAC CGCTCAATTC
CCAAACTTAA ACGTGTATTT TGCCGGTGAA GCAGAGCAGC AAAGCGAAAC TACCAGTTCC
ATGAGTACTA TGTTCATTGC GGCATTGTTG GTCATTTATG TGCTTTTGGC GATACCGCTC
AAATCGTATA TTCAACCCTT GCTGATCATG GTGGCGATCC CTTTTGGTAT TGTCGGGGCG
ATACTTGGTC ATTGGTGGAA TGACTTAACC ATTAGCATAT TGTCACTAAA CGGTATTCTT
GCCTTAAGTG GGGTGGTGGT GAACGACAGC TTGCTGCTGG TCTCGCGCTT TAACGAATTG
GTTAAAGAAG AAGGCTTAAG CGTGCATGAT GCAATTGTAG CGTCTTGCAC CAGTCGTTTA
CGAGCCGTGC TACTTACCTC GGTGACGACC TACGCCGGTT TGGTGCCTTT GTTGGGGGAA
ACATCCATGC AGGCGCAATT TTTGATTCCG GCCGCGGCGT CGCTCGGTTA CGGGATCTTG
TTTGCCACTG TTATTACCCT TATCTTGATC CCTGGTTTAC TGATGATTCA AATAGACGCT
AAGCGAGGCA TCATTAACCT ACTGACCTTG CTAGGGCTTA GAGCCAAACC CGATACTGAA
TCAGCATCTA CCCCCGCACA TTCCTAA
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| Protein sequence | MSQHQLPSSS GNNNPLHGII AWFANNSVAA NLLLVSVIVM GVMSLSTLRK EAFPSLEPDK
ISVSVKYDSG DALQAEEGIA LKIEEALETV PGIKRITSTS DATGSHVSIE KKTDYSLDEL
LTDVKNQVDA INNFPADAEQ PVIDKSRRQD HALTIQLYGD TDRHTLQTLG ELLKADLLAQ
SGISDVEQKG VLDPMMSVEI DEGKLQAYGL TISDISDVIN QESSSPLSTS LRDSSKIIRL
KAANQAYWQS DFANIVLLTT PSGAQIKMGD VAKVTDTFAE DANSLGRYNQ QNAVAIEILM
DDNSDITAIV EQAHSVIDNW QERGLLPQNV ELTSWYDKST MITERLSLLT KNAVTGIMMV
FVILAIFLNV RVALWVAGGL PFVFFGTLYF MTDTYAGLTI NEMTTFGFIM ALGIVVDDAV
VVGESVYSTR RQHGDSLNNT ILGTMKVAVP TIFGVLTTVA AFMTLSNVSG PLGQIYAQFA
TVVTICLLLS VVESKLILPS HLAHIDTQRQ VKAGLSGLWS KVQHGADYGL NWFSDNIYRK
VIEYSLRFRY AVVAGFMAFL ILVIGMPMTG AVKVGFFPSI PGDTVSADLV MQNDAAFGQT
NTSLFMLEQT ALQAEKNLMA KLDSQESEIT SLQVVSSGDT SGSVTVELIS GGAFSASEFA
KEWQRLSGTP EGSKKLQILA TRKMVDNFKV ELKAWDDETV MAAGALFKER LENTPGVNGI
DDNFNPGQPQ LKFTLNAQGR ALGMDTASLS QQVLQAFGGA IVQRYQRDKD EVKVRVRYPE
NARQTPADIM QSRIRLPDGT VVPLVNVATI SSEYQQDEIT RIDGLRAIYL SAQVDKNVIA
SNVLVDNLRR DLVPELTAQF PNLNVYFAGE AEQQSETTSS MSTMFIAALL VIYVLLAIPL
KSYIQPLLIM VAIPFGIVGA ILGHWWNDLT ISILSLNGIL ALSGVVVNDS LLLVSRFNEL
VKEEGLSVHD AIVASCTSRL RAVLLTSVTT YAGLVPLLGE TSMQAQFLIP AAASLGYGIL
FATVITLILI PGLLMIQIDA KRGIINLLTL LGLRAKPDTE SASTPAHS
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