Gene Patl_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3585 
Symbol 
ID4175365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4313337 
End bp4314131 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content42% 
IMG OID638056615 
Productputative DNA polymerase related protein 
Protein accessionYP_663141 
Protein GI109899886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTACCATCAC TTCCGTGCCC GGATATAACG AGTGGCGCAA AGCATCAAGA 
GAATGTTTAG CGCAAGCTAT CTCCCCTGAA AACATTATTT GGCAAACTTC AGAGTCCATA
CAGGACGACT TGTTTGGCCA TCCTGAAGAG GTTATTGCGG CCCCTAAAGG GCAAATGAAA
CACACCATTC CCAAGTCAAT ATTAATGCTT TTTAAATACG CGTTGTGTCA TCGAGATGCT
AGCCGCTTCG CACTGTGTTA TCGGGTTTTA TGGCGCGTTA TTTTCGAGAA CAAAAACCTT
ATTCAGCTAA AAACTGACGA AGATATAATG CAGCTTGTTA CTTTAGCCAA AGCGGTAAAA
CGTGATGCAT ACAAAATGAG TGCTTTTTTG AGGTTTAGAG AAGTTGCGCT TGACGGACAA
GAGCACTTTA TCGCTTGGTA TGAACCCGAG CATTTCAGCT TAGAGGTTAA ACTCGACTTC
TTCCAAACTC GCTTTAAAAA TATGCGCTGG TCGATACTGA CGCCTTATAG GGCTGCCCAT
TGGGACACTG AAAAGCTAGT GTTAGAAGAT AATCCCGACC CGAGTGTGTG TCCTGATGAA
GACCGTATCG AAAAATATTG GCTCACTTAT TACACTAATA TATTTAATCC CGCCCGTATC
AAAAAGAGCG CGATGCTAAG CTCAATGCCC AAAAAGTACT GGAAGAACAT GCCTGAAACA
GCACTGATTG ACGATATGAT TCGAAATTCA GATGCAAGAG CTCGCAAAAT GATTATCGAT
GGGAATAAAC GCTAA
 
Protein sequence
MKKITITSVP GYNEWRKASR ECLAQAISPE NIIWQTSESI QDDLFGHPEE VIAAPKGQMK 
HTIPKSILML FKYALCHRDA SRFALCYRVL WRVIFENKNL IQLKTDEDIM QLVTLAKAVK
RDAYKMSAFL RFREVALDGQ EHFIAWYEPE HFSLEVKLDF FQTRFKNMRW SILTPYRAAH
WDTEKLVLED NPDPSVCPDE DRIEKYWLTY YTNIFNPARI KKSAMLSSMP KKYWKNMPET
ALIDDMIRNS DARARKMIID GNKR