| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3584 |
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| Symbol | |
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| ID | 4175364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4312079 |
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| End bp | 4313320 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056614 |
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| Product | radical SAM family protein |
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| Protein accession | YP_663140 |
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| Protein GI | 109899885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGACA AACTGATTCA AAAACTCGAG ATCCTCTCAG ATGCAGCTAA GTACGATGCA
TCATGTGCAA GCGGTACGGC AGGTAAACGC AAGGCTGGGA AAACTGATAA AACGGGCATT
GGTTCGCTTA CTGGCGGTAC AGGAATATGC CACAGTTTTA CCCCTGATGG CCGCTGTGTC
TCATTACTAA AGATACTAAT GACGAACTAC TGTATTTACG ATTGTCACTA TTGTATCAAT
AGAGTATCAA GTAGTGTTCA ACGTGCTCGT TTCACTGTGA AAGAAACGGT AGATTTGACA
CTGAATTTTT ATAAGCGCAA CTATATCGAG GGCTTGTTTC TTAGCTCAGG TATCGTCGGT
TCCCCTGACC TTACAATGGA AAGCATGGTG CGTATTGCAA AGTCGTTACG TATCGATCAC
GGGTTCAAGG GGTATATACA CCTTAAAACA ATTCCCAATG CCTCGCCTGA ACTACAGGCT
GAAGCGGGTT TATATGCCGA CAGGCTTAGC ATTAATGTAG AAATGCCGAC CCAGCCTTCA
TTAAATAAAT ACGCGCCAGA AAAAGACCTC GGCGCTATTC ATAGCTCGAT GAATACTCTG
AAAGACAAAA TAGCCGAGCA TAAAGTAGAT AAAACGCATA CCGGCAAACG TCCACCTCGC
TTTGCCCCTG GCGGACAGTC TACTCAAATG ATCATAGGGG CCGATGGCTC AAACGATAAA
GTCATTTTGG GAACAAGTGT TAAACTTTAT AGCCAACAAA AGCTACGCCG CGTTTATTAC
TCTGCGTTCT CGCCAATACC TGATGCGTCT GAGGTTTTAC CGCTCAAGCC AGCGCCTTTG
ATCCGCGAGC ACCGTCTTTA TCAGGCTGAT TGGCTATTGC GTTTTTATGG CTTTAATCTT
GATGAAATCT TGCACGATGA CATGCTTGAT ATGGACCATG ATCCTAAACT CGCGTGGGCA
TTGCGCAATC GTCATGTATT CCCCATCGAT TTGAATAAAG CCGACAAACT GATGTTGTTA
CGAGTACCTG GTCTTGGTGC GCGCACCGTA CAAAAAATTG TAGCGATCCG CCGTTATACA
AAGCTTAACT GGATGGATCT CACTAAAATG CGTTTGCCAT TACAAAAGCT AAAACCTTTT
ATTACTGTGA ATGATTACTC ACCTGCTATT CACTTACTCG ATAGCAATAA TTTTGAGCTG
CAGTTCAAAC AGCCAAAACA GTTTGAGCTC TTCGGCGCCT AA
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| Protein sequence | MHDKLIQKLE ILSDAAKYDA SCASGTAGKR KAGKTDKTGI GSLTGGTGIC HSFTPDGRCV
SLLKILMTNY CIYDCHYCIN RVSSSVQRAR FTVKETVDLT LNFYKRNYIE GLFLSSGIVG
SPDLTMESMV RIAKSLRIDH GFKGYIHLKT IPNASPELQA EAGLYADRLS INVEMPTQPS
LNKYAPEKDL GAIHSSMNTL KDKIAEHKVD KTHTGKRPPR FAPGGQSTQM IIGADGSNDK
VILGTSVKLY SQQKLRRVYY SAFSPIPDAS EVLPLKPAPL IREHRLYQAD WLLRFYGFNL
DEILHDDMLD MDHDPKLAWA LRNRHVFPID LNKADKLMLL RVPGLGARTV QKIVAIRRYT
KLNWMDLTKM RLPLQKLKPF ITVNDYSPAI HLLDSNNFEL QFKQPKQFEL FGA
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