| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3583 |
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| Symbol | |
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| ID | 4175363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4309943 |
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| End bp | 4311136 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056613 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_663139 |
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| Protein GI | 109899884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGT TAATTGAAAA AGACATTCAG ACTATCCAGT CTATAGAAGC TGTGCCGCAT
ATAATGAAGA TGCTGTCAGA TGCCACCGGA TTGCGCTTCA TTTGCATTGC ACGGGTTACA
GATGAGAAGT GGACGACCTG CGCGGTATTC GATCAAGTCA ACTTCAACCT TCTTCCCGGT
GACGAGCTTG ATATATCTAC CACCTTTTGC ATTCAGGTAA AAAGGTCAAC TCAGCCGATT
GTTATTGAAC ATGCTCTAAA AGATGATCAC TACAGCAAAA GCGAAATTCC AATCATGTAT
GGGTTTGAAA GCTACTTTTC GTTTCCCATT TACAATAAAG ACGGTGATTT TTTCGGCACG
CTGTGCGGTT TAGATCCCCT ACCGATAAAG TTGAAAACGG TTGAGATTCA ACAACAAATT
AAGTCATTCG CTGAGTTGAT TTCTCGCCAG ATTGAAGTTG ACGAACAGCT CATCACTGCC
CAATCCGAGT TATTCAACGA GAAAGCAGCG GCCAAACTTC AAGAGCAGTA CATTGCCATT
CTAGGGCACG ACTTAAGAAC ACCATTATCT GCTTTGACTA TGGGGGTCAG TTTTTTAAAA
GACCAAGTAA CGGACGCCAC CTCTCAAAAA ATACTCGCAC GCATGGACAG CAGCGCAACA
AGAATGAAAC GCTTGATTAG CGATGTGATG GACCTAACCC GAGGTAAAAT GGGTAACGGC
ATGCAGTTAA ACGTTAAGAC GGTGAACAAC CTAGAAGATA TTCTTACCCA TACCGTTGAT
GAGCTCTCTG GGCTGCACCC CCAGCGTGAA ATACAGACTC ACATTGATAT CAAGGGCTCG
GTTAATTGCG ACCCTGAGCG AATCGCCCAG TTGCTATCTA ACCTGTTAAT CAACGCCATT
GTGCATGGCG ACCCGCAGCA AGCTATTGAG GTGACATCAC AGATAGAGAG CGGACTATTC
TCACTGAGCG TGAGTAATGG CGGCGAGCCA ATAAAACCAG AGGTGATTGA TAAACTGTTT
CAACCTTTTT GGCGCAATGA AAGCAACAAG CAAACCGGCG GCCTAGGTTT GGGTTTGTTT
ATTGCTTCCC AAATCACCTC TGCTCATGAC GGTACATTAT CCGTTTGCTC AGACGACAGC
AGAACGACGT TCACGTTTCA GGCAACTATT GGCATGAATG CGATTGAAGG TTAG
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| Protein sequence | MNALIEKDIQ TIQSIEAVPH IMKMLSDATG LRFICIARVT DEKWTTCAVF DQVNFNLLPG
DELDISTTFC IQVKRSTQPI VIEHALKDDH YSKSEIPIMY GFESYFSFPI YNKDGDFFGT
LCGLDPLPIK LKTVEIQQQI KSFAELISRQ IEVDEQLITA QSELFNEKAA AKLQEQYIAI
LGHDLRTPLS ALTMGVSFLK DQVTDATSQK ILARMDSSAT RMKRLISDVM DLTRGKMGNG
MQLNVKTVNN LEDILTHTVD ELSGLHPQRE IQTHIDIKGS VNCDPERIAQ LLSNLLINAI
VHGDPQQAIE VTSQIESGLF SLSVSNGGEP IKPEVIDKLF QPFWRNESNK QTGGLGLGLF
IASQITSAHD GTLSVCSDDS RTTFTFQATI GMNAIEG
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