| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3580 |
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| Symbol | thrA |
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| ID | 4175360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4304080 |
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| End bp | 4306542 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056610 |
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| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
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| Protein accession | YP_663136 |
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| Protein GI | 109899881 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTGT TGAAGTTTGG CGGTTCGTCA TTAGCTGATG CAGAGCGTTA TTTACGGGTT
AAAGATATCT GTTTGGATAC CCACGCAAGC AACGGCGCAG CTGTTGTGTT ATCAGCCCCT
AAAGGCGTAA CCAATGCGCT ATCTCTGTTA TGTGAAGAAG CGGGTAGTGG TAAAGATTAC
GGCGAGTTGT TCGCTAAGCT GAACATGGTG CTTTTCGGTA TTTTAGATGA TTTAAAAGAT
ACCCTACCTG AATTCGATGA CAGTGAACTT GCCCCTTACA TTCAACGCAT TTTGAATGAG
TTGAATCAAC ACCTTGAAGG TTTTGCGCTA TTACGCTGCG CGCCTGAATC TGTGGTCGCT
AAGATTTTGA GCATTGGCGA GTACATGAGC GTTAATATCT TCAGTCAGAT ACTGACCACC
CTTGGCACCA AAAACCAAAT TATCGACCCA GCTGAATTAA TTTTAGCAGA AGGCGATTAC
CTCGATAGCA TCGCCGATGT GGCCGTGAGC AAAGCACGTT TTAGTGACGT TGATAGCTCA
GGCGACGTAG TGCTTATTAT GCCAGGCTTT GTGGCCGTAA ATGCCGAAGG CGAGAAAGTC
ACGCTAGGGC GCAATGGCTC TGATTATTCA GCCGCTATTT TAGCTGCGTG TATCGATGCC
GAATGTTGTG AAATTTGGAC AGACGTTGAT GGCGTTTATA ATGCCGATCC TAACCAGGTT
GATGGTGCGG TATTGCTCGA TAAACTGACT TATCAAGAAG CCATGGAGCT TTCTTATTTC
GGGGCGAAAG TACTTCACCC GAAAACCATC GGGCCGATTG CACAGCACCA CATTCCCTGC
CTTATTCGTA ATACGCTTAA CCCAGCGGCT CCTGGCACGC TTATCAGCAA CGAAAAGAGC
ACCAAGTGGA CGAGCGTTAA AGGTATTTCG CATCTGGATG ACATGACCAT GTTTAATGTG
GCGGGCCCAG GTATGAAAGG CATGGTTGGT ATGGCCAGCC GTGTATTTGA AGTGATGTCG
AATGCGAATA TCTCGATCAG CCTTATTACG CAATCTTCTT CTGAGTACAG CATCAGTTTT
TGTATTCATA GTAAAGATGC CACCCGTGCT CAAGACTTGT TAGAAGACTC GTTTGCATTA
GAGTTAGCGA ATAACTTACT CGACCCGATT GAAGTACGTC ATGATTTAGC GATTGTGACC
TTGGTCGGTG ACGGTATGCG CCATTCACAA GGCTTGGCGG CTAAGTTCTT TAGCTCATTA
GCACAAGCGC GGGTAAACAA CGTGGCGATT GCTCAGGGCT CGTCTGAGCG TTCAATTTCA
ACGGTAATTG AAAGCAGCAA AGCGAGAAAA GCAGTGAAAG TGGTTCACCA GAATTTCTTT
TCAAATTTAC ACGCGATTGA TGTGTTCTTA GTGGGCTGTG GTACGGTCGG CAAAGAATTG
TTAGGGCAAA TTGCTCGCCA GCAAGCGGTG CTACTTGAAC GTGGCATAAG CTTGAAAATT
TACGGTATCG CCAACAGCCG CAAACTTTTA TTAGAAGCGG GCGGAGTGGA CTTAAGCGCC
GATTGGACAA GCCAGCTAAA TGCTAGCGAG CAGTCGCTTT CTGTTGATGC TTTGCAAAAC
TTTGTGATGC GCAACAGCTT GGTAAACCCG GTGGTGATTG ACTGCACTAG CAGCACAGTG
ATTGCTGAGC TGTACGTTGA GTTAATGAAT AGCGGCTTCC ATGTCGTTAC GCCTAACAAG
AAAGCCAATA CTGCGTCTTA CGCATATTAC CAGCAATTGC GTGAAACAGC GCAAAATACT
AATCGCCAGT TCTTGTATGA AACCACAGTA GGCGCGGGCT TACCGGTAAT CGATAACTTG
CAAAAACTGA TTTACGCCGG GGATGAACTT CAGCGCTTTG AAGGCATTTT GTCAGGTTCA
TTGTCATTTG TATTTGGTAA GTTAGATGAA GGTCTAACGC TTTCTCAAGC CACTGAAATT
GCTAAAAAGA ACGGCTTTAC TGAGCCAGAC CCGCGTGATG ATTTAAGCGG CACGGATGTG
GCCCGTAAAC TATTAATTAT GGCTCGCGAG GCTGACTTAA AGCTTGAACT TGAAGACATT
CAAATTGAGC CTGTGTTGCC ATCGCACTTT GACGATAGCG GTAGCATCGA CGAGTTCATG
GCAAAGCTAC CTGAGCTAGA TGCCCTGTAC ACAGATAAAG TTAACGCGGC CAAAGAAGAA
GGCAAAGTAC TGCGTTACGT AGGCTCTATC AGCAAAGGTA AATGCGTAGT CTCGATACAG
GCGGTGGGTG AGGATCACCC TCTGTTTGTG ATCAAAGAAG GCGAAAATGC GTTGGCGATC
CACAGTAATT ATTATCAGCC TATTCCTTAC GTAATACGTG GTTATGGGGC GGGCGCTGCG
GTAACAGCTG CAGGTGTTTT TGCTGATGTA CTTAGAACCA TGCCATGGAA GCAAGACGTG
TAA
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| Protein sequence | MKVLKFGGSS LADAERYLRV KDICLDTHAS NGAAVVLSAP KGVTNALSLL CEEAGSGKDY
GELFAKLNMV LFGILDDLKD TLPEFDDSEL APYIQRILNE LNQHLEGFAL LRCAPESVVA
KILSIGEYMS VNIFSQILTT LGTKNQIIDP AELILAEGDY LDSIADVAVS KARFSDVDSS
GDVVLIMPGF VAVNAEGEKV TLGRNGSDYS AAILAACIDA ECCEIWTDVD GVYNADPNQV
DGAVLLDKLT YQEAMELSYF GAKVLHPKTI GPIAQHHIPC LIRNTLNPAA PGTLISNEKS
TKWTSVKGIS HLDDMTMFNV AGPGMKGMVG MASRVFEVMS NANISISLIT QSSSEYSISF
CIHSKDATRA QDLLEDSFAL ELANNLLDPI EVRHDLAIVT LVGDGMRHSQ GLAAKFFSSL
AQARVNNVAI AQGSSERSIS TVIESSKARK AVKVVHQNFF SNLHAIDVFL VGCGTVGKEL
LGQIARQQAV LLERGISLKI YGIANSRKLL LEAGGVDLSA DWTSQLNASE QSLSVDALQN
FVMRNSLVNP VVIDCTSSTV IAELYVELMN SGFHVVTPNK KANTASYAYY QQLRETAQNT
NRQFLYETTV GAGLPVIDNL QKLIYAGDEL QRFEGILSGS LSFVFGKLDE GLTLSQATEI
AKKNGFTEPD PRDDLSGTDV ARKLLIMARE ADLKLELEDI QIEPVLPSHF DDSGSIDEFM
AKLPELDALY TDKVNAAKEE GKVLRYVGSI SKGKCVVSIQ AVGEDHPLFV IKEGENALAI
HSNYYQPIPY VIRGYGAGAA VTAAGVFADV LRTMPWKQDV
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