Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3571 |
Symbol | |
ID | 4175351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4294015 |
End bp | 4294713 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056601 |
Product | two component transcriptional regulator |
Protein accession | YP_663127 |
Protein GI | 109899872 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000262211 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCACA TATTACTTGT TGAGGATGAC GCGCGACTCA GCCAGCTTGT GAGTGAATAC TTGAACCAAC ATGATTTCAC CGTGACCAGT TTAAGTGACG GCACGGGTTT GCTTGATGAG ATTAAACAAC ATTCGCCAGA TTTGGTTGTG CTTGACGTTA TGCTACCGGG GGATAACGGC TTTACGTTGT GCAAAAAAAT TCGCCCTGAA TATCAAGGAC CGCTGTTGTT TATGACGGCA AAAAATAGCG ATTTTGATCA TGTACTCGGC CTTGAGATTG GCGCAGATGA TTACGTTATG AAACCGGTCG AACCCCGGGT GCTGTTAGCG CGTATTCAAG CGCTGCTGAG ACGAAGTAAT ACTATTAAAG CCCCAATTGA GAGAGCGACC CAACTGCGTT TTGGTCAGCT AACGCTTGAT TATCTAGCAC GCAAGGTGAC CCTTAAAAAC GAAGATGTGC CCCTAACCAG CCATGAATTC GATATGCTCT GGAAGTTAGC CGCAAATGCG TCCCAGCTAG TGGATCGCAA TACGCTATAC CGCGAGCTTA TCGGCAGAGA ATATGATGGT TTAGACCGCT CAGCGGATGT GCGCATTTCG CGTCTGCGTA AAAAACTGCA GGATGACCCT CGTCATCCCT ATCGTATTAA AACCATCTGG GGAAAAGGGT TTTATTTCGT CGCTGACGCG TGGGAATAA
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Protein sequence | MPHILLVEDD ARLSQLVSEY LNQHDFTVTS LSDGTGLLDE IKQHSPDLVV LDVMLPGDNG FTLCKKIRPE YQGPLLFMTA KNSDFDHVLG LEIGADDYVM KPVEPRVLLA RIQALLRRSN TIKAPIERAT QLRFGQLTLD YLARKVTLKN EDVPLTSHEF DMLWKLAANA SQLVDRNTLY RELIGREYDG LDRSADVRIS RLRKKLQDDP RHPYRIKTIW GKGFYFVADA WE
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