Gene Patl_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3570 
Symbol 
ID4175350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4293635 
End bp4294015 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content47% 
IMG OID638056600 
Producthypothetical protein 
Protein accessionYP_663126 
Protein GI109899871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000944882 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGTGC TGTTAGCCTG TTTAAGCATA GTTTTAGGGG ACAAAGTACA CGCTGTAGAG 
CATGACGTTA ACTGGCAAAT TCAGCCGATA GTGTGCGTCA CTCAGCGCGT TGGCACACAG
TGCCAGTTTA CGCTCTCAGT TCAGGTACAA AACGAACACC AGCAGGAATA CTGTGTGTAT
GTGGTTAAAC TGTCACCACA ACGGCTATTT TGCTCCAGCG AAACGGTTGT GCAAAAAGAC
TTAACCCTGA CCATAGACGA CAACACACGT TTATTATTAA AAGACGCATT GGGTGGAACC
CTTCTTCAAC AACCGTTAGG GGTGAAGTCG ACCCGGCGCA GTACCCGTTT TCGGGTCAAC
AATCCTTGGA GCCTTTTCTA A
 
Protein sequence
MRVLLACLSI VLGDKVHAVE HDVNWQIQPI VCVTQRVGTQ CQFTLSVQVQ NEHQQEYCVY 
VVKLSPQRLF CSSETVVQKD LTLTIDDNTR LLLKDALGGT LLQQPLGVKS TRRSTRFRVN
NPWSLF