Gene Patl_3567 details

Gene Information

• Locus tag: Patl_3567
• ID: 4175347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4290160
• End bp: 4290693
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638056597
• Product: hypothetical protein
• Protein accession: YP_663123
• Protein GI: 109899868

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00374365
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAATC TAGCTGTCGC CCTGTTATCG GGCGTTACGT TAATGTTATC CGCGCAGGCC 
TACAGCCAGG CCAAAGTGGA TGTGACGTGG CAAGACCCAG AGAAATACAC AGATGTGCGC 
CCTTCAAATG AGTCGCGTAC CCGCTTTAAA GAGCGCACGT TTAAACAATT AGACGAATAT 
ATTACAGAGC TCGCTAAAAC CTTGCCTGAA GGCCAGACCC TGAAGATGAA CGTAACGAAC 
TTAGATTTAG CAGGGCAGGT TTGGCCCGCT TCGTTTGTGG GTATGGGCAG TGGGGCAAAC 
GATGTGCGCC TGATTAAAAG TATTGATATT CCGCGCATCG CGTTTAGCTT TGAGTTGCTT 
GGGGCCGATG GCGCTGTAAT TCAGCAAGGT GAGCAAAACT TAAAAGACAT GTCTTTTCAA 
AATCGCCACA ATCCGTTTTT TGCGTCTGAG AACTTACGTT ATGAGAAAAA CATGATACGA 
ATGTGGTTCG ATGAGCAATT TCCCCAGGAA GTCGCAAAAA AGAATACTCA CTAA 

 

Protein sequence

MKNLAVALLS GVTLMLSAQA YSQAKVDVTW QDPEKYTDVR PSNESRTRFK ERTFKQLDEY 
ITELAKTLPE GQTLKMNVTN LDLAGQVWPA SFVGMGSGAN DVRLIKSIDI PRIAFSFELL 
GADGAVIQQG EQNLKDMSFQ NRHNPFFASE NLRYEKNMIR MWFDEQFPQE VAKKNTH