| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3561 |
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| Symbol | |
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| ID | 4175341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4280410 |
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| End bp | 4281516 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056591 |
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| Product | permease YjgP/YjgQ |
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| Protein accession | YP_663117 |
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| Protein GI | 109899862 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000903673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGATAT TTCGTTATTT AGTTAAAGAA ACCGTCAAAT CCCAAACTGC CGTTTTTCTG
GTTTTGATGG CCATTTTTAT TACCAATAAA TTTGTTAGGG TGCTCTCTGA AGCCTCAAAC
GGTGACATTC CTGCTAGCCT AGTTCTGGGT TTCTTAGCCT TGAGTATGCC GGTATTGGCC
TCGCTTATTT TACCTCTGAG CTTATTTTTG GGGATCATGC TTGCTCATGG CCGTTTGTAC
GTAGACAGCG AAATGACTGT GATGCGGGCG TGCGGTATCA GTGAATGGTA CGTGACACGC
GTTATGCTAG TGCTTGCTGT GATCATGGCC TTGATAACAG GAGCCATGAC ATTATGGATA
GCGCCCCTGT CAGTAGAGCG AGAATATCAA CTTGAAGAAC AAGCGGGTGC AGATACAGGT
TTAACCACAT TAATTCCTGG GCGTTTTCAA CAAACCGCCA ATGAAAAAGC AGTGATTTTT
GTACATGAAA TCGGTAACGA CAGTGAACCG CTCAAACGTG TGTTTATGGC ACAACACGAC
ACCACCACCG ATAGCCAAAA TGTACACTTG GTTTACGCTA AACAAGGCGG CTTGCGTGAA
CTGCCTGATG GCTCTGAAAC GCTAGTGCTT GGCGATGGTA TTCAGTACGA AGGTACGCTC
GGTGAAAAGG ACTACCGCGT GGTCGAATTT GGTGAGTATC AAATTCAAAT TGCAGAGCAA
GAAGCAGAGC AAAAACGGCG CAAATTATCG GCATACACCA CCATGCAATT GTTTGAAGAC
TCATCCATCG ATGCTATAGC CGAATTGCAG TGGCGTTTTG CAATTCCATT ATCCTTATTT
TTCTTGGTGA TTATTGCTGT GCCCTTAAGC GCTGCTGACC CGCGACAAGG GCGCTTTGGT
AAAATGTTCC CAGCACTCAT GTTGTATCTT GGTTACTTTT TGTTGTTGCT TGCCGGGCGT
AAAGTGCTCG AAGATGGCAA AATACCGCCG ATGCTCGGTT TATGGTGGGT GCACGCTGTC
ATAGGTATCA TTGGTATGAC GCTGATCTTT AAAGGGCGGC CAGTGGGCGT GCGAATACGA
GCACGATTGC GGGGGAACAA AGCATGA
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| Protein sequence | MLIFRYLVKE TVKSQTAVFL VLMAIFITNK FVRVLSEASN GDIPASLVLG FLALSMPVLA
SLILPLSLFL GIMLAHGRLY VDSEMTVMRA CGISEWYVTR VMLVLAVIMA LITGAMTLWI
APLSVEREYQ LEEQAGADTG LTTLIPGRFQ QTANEKAVIF VHEIGNDSEP LKRVFMAQHD
TTTDSQNVHL VYAKQGGLRE LPDGSETLVL GDGIQYEGTL GEKDYRVVEF GEYQIQIAEQ
EAEQKRRKLS AYTTMQLFED SSIDAIAELQ WRFAIPLSLF FLVIIAVPLS AADPRQGRFG
KMFPALMLYL GYFLLLLAGR KVLEDGKIPP MLGLWWVHAV IGIIGMTLIF KGRPVGVRIR
ARLRGNKA
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