| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3534 |
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| Symbol | |
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| ID | 4175313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4241314 |
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| End bp | 4242396 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056563 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_663090 |
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| Protein GI | 109899835 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAC ATCGTCTTTT TGGGACGCTG CCTGACGGAC AGAAAGTCAC TGAATACAGC
TTGCGAAATA AAGTCGGAAT GCAGGTAGAT ATTCTTGATT TGGGCGGCAT CATTCGTCGC
TGGTTAGTGC CAGATGCAGA ACCGTTAAAA TCAGATGCGC CGCAGGCACC AGTGGATATC
GTGCTTGGCT TCGATACTCT CGAAGATTAT ATCGCTGACC AAGCTTACGT AGGGGCACTT
GTTGGGCGCT ACGCAAACCG TATCGCCAAA GGACATTTCG CTTTAAACGA TGTAAATTAT
CAGTTAGATG TGAATCAAGG TGGTAACAGC TTACATGGCG GTTTTGAAGG GTTTAATCGC
CGAGTTTGGC AAGCGCAAAC ACTAGATAAT GACGCTGAAG CCTCCTTGAT GCTAACGCTT
ACCAGTGACG ATGGCGATCA AGGCTTTCCC GGTCGATTAG AAGTCAATGT GACTTACACT
TTGCATGAAA CGGGTTTGAA AATAACCTAC CGCGCAAAAG CAGCGCAAGA CACGGTGTTC
AATCCTACCC AACACAGTTA CTTTAACTTA GCCGGACATA ACAGCGGCTC CATTGAAGAT
CATCAAGTGC AAATTTTGGC CAGTCATTAC ACCCCAACCG ATGAGAACGC TATCCCCACG
GGGGAATTGG TTGATGTAAA TAACACGCCG TTTGACTTGC GTGAAATGAC GACACTTAAG
AGCCCATTGC AGTCCAGCCA TAAGCAGATA AAACTTGGTA ATGGCTTTGA TCACAACTGG
TGCTTAGATG CTTACCAAGC CAAGATGAAT GCGCCAGAGC TGGTCGCTAA GGCTTTCGAG
CCAAAAAGTC GGCGCACTAT GCGTGTTTTG ACCACTATGC CTGGCATGCA GCTTTACACA
GCAAATTACG TTGGACCAGA GCCCATTGGA AAAGGCGCAA CAGAGTATCA AGGCAAACAA
GCATACTGCT TTGAAACGCA GTTCTACCCA GACTCACCTA ATCAAAGTCA TTTCCCCAGC
GCCACGCTTA AGGCCAATGA AGAGCATTAC TCGGTGACCG AATATCGTTT ATCCTTTTCG
TAG
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| Protein sequence | MIKHRLFGTL PDGQKVTEYS LRNKVGMQVD ILDLGGIIRR WLVPDAEPLK SDAPQAPVDI
VLGFDTLEDY IADQAYVGAL VGRYANRIAK GHFALNDVNY QLDVNQGGNS LHGGFEGFNR
RVWQAQTLDN DAEASLMLTL TSDDGDQGFP GRLEVNVTYT LHETGLKITY RAKAAQDTVF
NPTQHSYFNL AGHNSGSIED HQVQILASHY TPTDENAIPT GELVDVNNTP FDLREMTTLK
SPLQSSHKQI KLGNGFDHNW CLDAYQAKMN APELVAKAFE PKSRRTMRVL TTMPGMQLYT
ANYVGPEPIG KGATEYQGKQ AYCFETQFYP DSPNQSHFPS ATLKANEEHY SVTEYRLSFS
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