Gene Patl_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3525 
Symbol 
ID4175304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4232393 
End bp4234153 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content48% 
IMG OID638056554 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_663081 
Protein GI109899826 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGAG TTAGCACCAA CAAAAAACGT AATCAGCAAG CGAAGCAAAA TGTCGCCCCT 
ACTGCTTTGC AGTGGCGCTA TTTGCTCGTG ATAGGCGTGA TTATGTTGGT GTTTGTTGGG
CTATCAGCGC GGGCAGTTTA CATTCAAGTT ATTGACCCTG ACTTGCTGAT TAAGCAAGGG
GATAACCGCA CATTACGCAC ACAAAATATG CCGGTGCATA GAGGTTTAAT AACCGATAGA
AACGGCCAGA ATTTGGCGGT AAGTGTGCCA GTAAGAGCCA TTTGGGCTGA CCCGAAAACC
ATCGTTGAAA ACGGTTCATT AAATGACAAG CGCCGCTGGC AGGCGCTCGC TGACGTGTTA
GGTCAAGATT ACACCAAGCT CGTTTCACGC GTGAAAAATC CGAAAAAGCG TTTTGTGTAC
ATTCAACGTC AAGTTTCACC CGCGATGGCT GATTATGTGG ATCAGCTTTC AATCAGTGGG
GTGTATTTGC GAGACGAGTC TCGTCGCTAT TACCCAACAG GAGAAGTGTC TGCACAGCTA
ATTGGTTTCA CCAATGTTGA CGATCAGGGC ATCGAGGGTA TCGAAAAGTT ATATAACGAA
TGGCTGAAGG GAGCCCCCGG CAGTCGTAAA ATTCGTCGTG ATGGCAAAGG CCGTCAGGTG
GAAATTTTAG AGCAAGAAGC CGGTGAAGAG CCAAAAGATA TTCAGTTGAC GATTGACCAG
CGTATTCAGG CCTTTGCCTA CAAAGAATTG AAAAAAGCCG TGCAGTATTA CAAAGCCACT
TCCGCTTCAG CCGTGGTGGT TGATGTGCAA ACTGGCGAGA TACTGGCCAT GGTTAATAAC
CCGTCTTATA ACCCGAATAA TCGTAGCGGC GTTTCTGGTC ACAGGATTCG TAATCGCGCG
ATTACAGATG CTTTTGAGCC CGGCTCATCG ATTAAGCCTA TTGCGGTGCT TAGCGCATTG
GAATTTGGCT CAGTAGAAAT GGACAGCGTT ATTGATACCT CACCTGGTTG GATGCGCGTG
GGCGGCAGCA TGGTGCGAGA TTCTCGTAAC TACGGTGAGT TGGATTTAAC CGGGATCATT
CGTAAATCGA GTAATATGGG CACCTCAAAG TTGGCTTTAT CTGTGCCAAA GCAATTCTTG
ATAGATCAGT ATTACAACAT GGGGTTAATG AGCGACACAG GCTCGAACCT TATTGGTGAA
AGTAGCGGTA TATTTCACGA TCGCAGCCGC TGGTCAGAGT TTGAATTATC CACCTTATCA
TTTGGTTATG GCTTGTCGGT GACCACAGCC CAGCTAGCCA GAATGTATAG TGTATTGGGC
AGTGGCGGCA TTAAACGCCC GCTTAGCGTG ATAAAGAGTG AGCAAAAAGC GCCCGAAGAG
CGAGTACTCA GCGAGGACAT CGCTCATGAA GTACTGACCA TGATGGAAAG TGTTGTCAAT
GAAGGCGGCT CAGGCACGAA AGCGCGTGTT CCTGGTTATC GCGTAGCAGG CAAAACGGGC
ACCAGTCGAA AAGCGGTCGC TGGTGGTTAC GGCGAAGAGT ACGTCAGTAT TTTCGCTGGT
GTGGCGCCTG TATCTGACCC GCAACTTGCG GTAGTGGTAC TGATCAACGA ACCCCGCGGT
GACTTATATT ATGCGGGTGA TACCGCAGCG CCTGTGTTCT CAAAAATTAT GTCTAATAGT
TTGCAAATGT TAAACGTTCC CCCCGATGAC AAATCAGTGT CTTCACTGGC CTCAATTACG
GGAGCGTCTC ATGCTGGATA G
 
Protein sequence
MSRVSTNKKR NQQAKQNVAP TALQWRYLLV IGVIMLVFVG LSARAVYIQV IDPDLLIKQG 
DNRTLRTQNM PVHRGLITDR NGQNLAVSVP VRAIWADPKT IVENGSLNDK RRWQALADVL
GQDYTKLVSR VKNPKKRFVY IQRQVSPAMA DYVDQLSISG VYLRDESRRY YPTGEVSAQL
IGFTNVDDQG IEGIEKLYNE WLKGAPGSRK IRRDGKGRQV EILEQEAGEE PKDIQLTIDQ
RIQAFAYKEL KKAVQYYKAT SASAVVVDVQ TGEILAMVNN PSYNPNNRSG VSGHRIRNRA
ITDAFEPGSS IKPIAVLSAL EFGSVEMDSV IDTSPGWMRV GGSMVRDSRN YGELDLTGII
RKSSNMGTSK LALSVPKQFL IDQYYNMGLM SDTGSNLIGE SSGIFHDRSR WSEFELSTLS
FGYGLSVTTA QLARMYSVLG SGGIKRPLSV IKSEQKAPEE RVLSEDIAHE VLTMMESVVN
EGGSGTKARV PGYRVAGKTG TSRKAVAGGY GEEYVSIFAG VAPVSDPQLA VVVLINEPRG
DLYYAGDTAA PVFSKIMSNS LQMLNVPPDD KSVSSLASIT GASHAG