Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3525 |
Symbol | |
ID | 4175304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4232393 |
End bp | 4234153 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638056554 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_663081 |
Protein GI | 109899826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGAG TTAGCACCAA CAAAAAACGT AATCAGCAAG CGAAGCAAAA TGTCGCCCCT ACTGCTTTGC AGTGGCGCTA TTTGCTCGTG ATAGGCGTGA TTATGTTGGT GTTTGTTGGG CTATCAGCGC GGGCAGTTTA CATTCAAGTT ATTGACCCTG ACTTGCTGAT TAAGCAAGGG GATAACCGCA CATTACGCAC ACAAAATATG CCGGTGCATA GAGGTTTAAT AACCGATAGA AACGGCCAGA ATTTGGCGGT AAGTGTGCCA GTAAGAGCCA TTTGGGCTGA CCCGAAAACC ATCGTTGAAA ACGGTTCATT AAATGACAAG CGCCGCTGGC AGGCGCTCGC TGACGTGTTA GGTCAAGATT ACACCAAGCT CGTTTCACGC GTGAAAAATC CGAAAAAGCG TTTTGTGTAC ATTCAACGTC AAGTTTCACC CGCGATGGCT GATTATGTGG ATCAGCTTTC AATCAGTGGG GTGTATTTGC GAGACGAGTC TCGTCGCTAT TACCCAACAG GAGAAGTGTC TGCACAGCTA ATTGGTTTCA CCAATGTTGA CGATCAGGGC ATCGAGGGTA TCGAAAAGTT ATATAACGAA TGGCTGAAGG GAGCCCCCGG CAGTCGTAAA ATTCGTCGTG ATGGCAAAGG CCGTCAGGTG GAAATTTTAG AGCAAGAAGC CGGTGAAGAG CCAAAAGATA TTCAGTTGAC GATTGACCAG CGTATTCAGG CCTTTGCCTA CAAAGAATTG AAAAAAGCCG TGCAGTATTA CAAAGCCACT TCCGCTTCAG CCGTGGTGGT TGATGTGCAA ACTGGCGAGA TACTGGCCAT GGTTAATAAC CCGTCTTATA ACCCGAATAA TCGTAGCGGC GTTTCTGGTC ACAGGATTCG TAATCGCGCG ATTACAGATG CTTTTGAGCC CGGCTCATCG ATTAAGCCTA TTGCGGTGCT TAGCGCATTG GAATTTGGCT CAGTAGAAAT GGACAGCGTT ATTGATACCT CACCTGGTTG GATGCGCGTG GGCGGCAGCA TGGTGCGAGA TTCTCGTAAC TACGGTGAGT TGGATTTAAC CGGGATCATT CGTAAATCGA GTAATATGGG CACCTCAAAG TTGGCTTTAT CTGTGCCAAA GCAATTCTTG ATAGATCAGT ATTACAACAT GGGGTTAATG AGCGACACAG GCTCGAACCT TATTGGTGAA AGTAGCGGTA TATTTCACGA TCGCAGCCGC TGGTCAGAGT TTGAATTATC CACCTTATCA TTTGGTTATG GCTTGTCGGT GACCACAGCC CAGCTAGCCA GAATGTATAG TGTATTGGGC AGTGGCGGCA TTAAACGCCC GCTTAGCGTG ATAAAGAGTG AGCAAAAAGC GCCCGAAGAG CGAGTACTCA GCGAGGACAT CGCTCATGAA GTACTGACCA TGATGGAAAG TGTTGTCAAT GAAGGCGGCT CAGGCACGAA AGCGCGTGTT CCTGGTTATC GCGTAGCAGG CAAAACGGGC ACCAGTCGAA AAGCGGTCGC TGGTGGTTAC GGCGAAGAGT ACGTCAGTAT TTTCGCTGGT GTGGCGCCTG TATCTGACCC GCAACTTGCG GTAGTGGTAC TGATCAACGA ACCCCGCGGT GACTTATATT ATGCGGGTGA TACCGCAGCG CCTGTGTTCT CAAAAATTAT GTCTAATAGT TTGCAAATGT TAAACGTTCC CCCCGATGAC AAATCAGTGT CTTCACTGGC CTCAATTACG GGAGCGTCTC ATGCTGGATA G
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Protein sequence | MSRVSTNKKR NQQAKQNVAP TALQWRYLLV IGVIMLVFVG LSARAVYIQV IDPDLLIKQG DNRTLRTQNM PVHRGLITDR NGQNLAVSVP VRAIWADPKT IVENGSLNDK RRWQALADVL GQDYTKLVSR VKNPKKRFVY IQRQVSPAMA DYVDQLSISG VYLRDESRRY YPTGEVSAQL IGFTNVDDQG IEGIEKLYNE WLKGAPGSRK IRRDGKGRQV EILEQEAGEE PKDIQLTIDQ RIQAFAYKEL KKAVQYYKAT SASAVVVDVQ TGEILAMVNN PSYNPNNRSG VSGHRIRNRA ITDAFEPGSS IKPIAVLSAL EFGSVEMDSV IDTSPGWMRV GGSMVRDSRN YGELDLTGII RKSSNMGTSK LALSVPKQFL IDQYYNMGLM SDTGSNLIGE SSGIFHDRSR WSEFELSTLS FGYGLSVTTA QLARMYSVLG SGGIKRPLSV IKSEQKAPEE RVLSEDIAHE VLTMMESVVN EGGSGTKARV PGYRVAGKTG TSRKAVAGGY GEEYVSIFAG VAPVSDPQLA VVVLINEPRG DLYYAGDTAA PVFSKIMSNS LQMLNVPPDD KSVSSLASIT GASHAG
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